Gene Sros_1793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1793 
Symbol 
ID8665071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1912647 
End bp1913573 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content64% 
IMG OID 
ProductABC-type proline/glycine betaine transport systems periplasmic components-like protein 
Protein accessionYP_003337526 
Protein GI271963330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAAGAC AACTCGCCGG GGTCGTCACG GCGCTCCTCC TGCTCACCGC GTGCGGCGGT 
GAGCGGGAGG CGCCCCCGCC GACCGGCGGC ACCGTGAAGA TCGCCATCAA CGGGTGGGCG
GGCTACGAGG CCAGCGCGGC CGTCCTCGGC CGGCTCCTGG AACAGGAGCT CGGCTACGAG
GTGCGGAGGG TGGAGCTCAA CGAGGCCGAA TCGTGGGAGG GGCTCGAAAA GGGCACGGTG
GACGTCATCG TCGAGAACTG GGGCCGCGAG GCCGAGAAGA AGACCTACAT CGAGGAGAAG
AAGGTCGCCG TCTCGGCCGG AAGAAACGGA AACAAAGGGG TGATCGGGTG GTATGTCCCG
CAGTGGATGG CCGACCGGTA CCCGGACATC ACTGACTGGC GGAAGCTCAA CAAGTACGCC
CACCTATTTA AGACCGATAA ATCAGGTAAT TTCGGCCAAC TCCTCGACGG GGACGCCTCC
TACGTCACCA ACGACGAGGC GCTGGTCCGC AATCTCGGGC TCGACTACAA GGTCGTCTAC
GCGGGCAGCG AGAAAGCCCT GATAAAGGCA GCCAAACTGG CCACCCGGAA CCGCACGCCA
CTGCTGATGT ATTTCTACGA ACCGCAGTGG CTGTTCACCC AGATCAAGCT GGCGAAGATC
AACCTCCCTC CCTACGCGAT CGGCTGCGAC GCCGACGCCG CGAAGGTCGC CTGCGACTAC
CCGCCCTACC TGCTCGACAA GATCGTGAGC AGAAGGTTCG CCGACACCGG CGGCAGAGCC
TACGAGCTGG TGCGCAACTT CACGTGGACG AACGACCAGC AGAACGCGGT CGCGGACGAC
ATGACCGGCG GCCTGAGCGC CGACCAGGCG GCCCGCAAGT GGATCGAGGC GAACAAGATC
GTGTGGAAGG ACTGGATGCC CGCCTGA
 
Protein sequence
MRRQLAGVVT ALLLLTACGG EREAPPPTGG TVKIAINGWA GYEASAAVLG RLLEQELGYE 
VRRVELNEAE SWEGLEKGTV DVIVENWGRE AEKKTYIEEK KVAVSAGRNG NKGVIGWYVP
QWMADRYPDI TDWRKLNKYA HLFKTDKSGN FGQLLDGDAS YVTNDEALVR NLGLDYKVVY
AGSEKALIKA AKLATRNRTP LLMYFYEPQW LFTQIKLAKI NLPPYAIGCD ADAAKVACDY
PPYLLDKIVS RRFADTGGRA YELVRNFTWT NDQQNAVADD MTGGLSADQA ARKWIEANKI
VWKDWMPA