| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_5013 |
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| Symbol | |
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| ID | 6181274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2172129 |
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| End bp | 2172992 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684765 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001811675 |
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| Protein GI | 172064024 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.773221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGT TCGGAAAACT GTTGTGGACG GGCGCGGTGT CGGCCATGGT GGCGCTAAGC
GCGTCAGCAC TTGCGGATAC GAAGCCGACA CTGAAAATCG GCTACGTCGA AGGCTGGGAC
GACAGCGTCG CGACGTCGAA CGTCGCGGCT CGCGTGATCG AGAAGAAGCT CGGCTACGAG
GTGAAGCTCG TGCCGGTCGC GGCCGGGATC ATGTGGCAGG GCGTGGCGCG CGGCGATCTC
GACGCGACGC TGTCGGCCTG GCTGCCGGTC ACGCACGGCT CGTACTGGAG CGAATACAAG
AGCAAGGTCG TCGACGTCGG CGCGAACTTT CCCGACGCGA AGATCGGCCT GATTGTCCCG
GATTACGTGA AGGCGAAGAG CATCGACGAT CTGAACGCGG AGAAGAGCAG CTTCGGCGGC
CGGATCGTCG GCATCGATGC CGGTGCGGGC GTGATGCGCA AGACCGACGA AGCGATCAAG
AGCTATGGCC TCAGCTACAC GCTGATGCCG AGTTCGGGCA GCGCGATGAC GGCTGAGCTG
TCGCGCTCCG TCAGTGCGAA CAAGCCGGTG ATCGTGACCG GCTGGGCGCC GCACTGGATG
TTCGCGAAGT GGAAGCTGCG CTTCCTCGAG GATCCGAAGA AGGTGTTCGG GGGCGCGGAG
CACGTCGACA GCGTCGTGAA TCCGCAGCTC GAAACGAAGG CCAAGCCGGT CGTCGCGTTC
CTGAAGAAAT TCCAGTGGAA ACCGGGCGAG ATCGACAGCG TGATGCTCGC GATCCAGAAC
GGCTCGAAGC CGGAAGCGGC CGCCGATGCG TGGATCGCAG CCCATGCGGA TCGCGTGAAT
TCGTGGACCG AAGGCACCCA GTAA
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| Protein sequence | MKLFGKLLWT GAVSAMVALS ASALADTKPT LKIGYVEGWD DSVATSNVAA RVIEKKLGYE
VKLVPVAAGI MWQGVARGDL DATLSAWLPV THGSYWSEYK SKVVDVGANF PDAKIGLIVP
DYVKAKSIDD LNAEKSSFGG RIVGIDAGAG VMRKTDEAIK SYGLSYTLMP SSGSAMTAEL
SRSVSANKPV IVTGWAPHWM FAKWKLRFLE DPKKVFGGAE HVDSVVNPQL ETKAKPVVAF
LKKFQWKPGE IDSVMLAIQN GSKPEAAADA WIAAHADRVN SWTEGTQ
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