Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3558 |
Symbol | |
ID | 1045582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4037186 |
End bp | 4038202 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146973 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | NP_745695 |
Protein GI | 26990270 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.561868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGCA TTTCAACGCT GCTGGCCGGG CTGCTGTTGA CGGTGGGTTT GGCCAGCACC GACAGCGCCG CATCGGCAGA GCAACCTGCG CCTATCCATT TTGGTGCCAT CGGCTGGGAA AGCGGCGCCC TCACCACCGA GATCCTGCGC CTGATCGTGG AGCGCGGCTA CGGCTACCGC ACCGACACCC TGCCTGGCAG CACGGTCAGC ATGGAGGTGG CCCTGGCGCG CAATGACCTG CAAGTGATCG CCGAGGAATG GGCCGGGCGC AGCCCTGCCT GGGTCAAGGC CGAACAGGCC GGCCAGGTAT TCGCACTGGG CGATACGGTC AAAAATGCAG AGGAAGGTTG GTGGGTACCG GCCTATGTGA TCGAGGGCGA TGCCGCACGC AACCTGAAGC CCGTGGCGCC TGAGCTGCAC AGTGTCGAGG ACCTCAAGCG TTACCCGCAG GTATTTTCTG ACCCCGAATC GCCCGGTAAA GGGCGTTTTC TCAACAGCCC AAGCGGCTGG ACGTCTGAAA CCGTCAACAG CCAAAAGCTC AAGGCCTATG GCCTGGATGG CCTTTACAAC AACTTCCGCA GTGGCTCCGG CGCCGCGATG GACGCCGAGA TCGGTTCGGC AATCCGGCGC GGCAAACCTG TGCTGTTCTA CTACTGGAAC CCGACCCCGC TGATGGGGCG CTACAAGCTC ATCCGGCTGG AAGAACCCCC GTTCGATGCC CAGGCCTGGG CCACCCTCAC CGACCCCGCC AACCCCAACC CGAAAGGCAG CCGCTCGCTG CCGGCAAAGT TGTCGATTGG CGTGTCCAAA GCCTTTCGCG AAAACTACCC AGACCTGGTC AGCGTGTTCG AACAGGTAGA CCTGCCCATC GATCGCCTGA ACAAGGCCCT GGCCGTCATG AGCGAAAAAC GCACGCCCCC GCGCGAAGCC GCCCTGACCT TCCTGCGCGA TAATCGCGAG GTGTGGAAAG CCTGGCTGCC GGCGGACATC GCCGCCAAGG TCGAGGCCAG CCTGTGA
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Protein sequence | MKSISTLLAG LLLTVGLAST DSAASAEQPA PIHFGAIGWE SGALTTEILR LIVERGYGYR TDTLPGSTVS MEVALARNDL QVIAEEWAGR SPAWVKAEQA GQVFALGDTV KNAEEGWWVP AYVIEGDAAR NLKPVAPELH SVEDLKRYPQ VFSDPESPGK GRFLNSPSGW TSETVNSQKL KAYGLDGLYN NFRSGSGAAM DAEIGSAIRR GKPVLFYYWN PTPLMGRYKL IRLEEPPFDA QAWATLTDPA NPNPKGSRSL PAKLSIGVSK AFRENYPDLV SVFEQVDLPI DRLNKALAVM SEKRTPPREA ALTFLRDNRE VWKAWLPADI AAKVEASL
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