| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3058 |
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| Symbol | |
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| ID | 1184715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3438739 |
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| End bp | 3439716 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637394418 |
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| Product | glycine betaine ABC transporter, periplasmic glycine betaine-binding protein |
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| Protein accession | NP_792852 |
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| Protein GI | 28870233 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.302341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCT TGGCGCTTGC CCTGTCTCCG CTTATGGCTT CGGCTGCCCA GGAACCCGGC
AAGGGCGTCT CTATCACACC GATCTTTCCA AGCATTGCGG AGGAGCGTTT TCGCGGTGAA
ATCGCCATGG CAGGGCTTAA AGAACTTGGT TACAAGGTGG AGCAGCCTAA GGAAACCGAT
TACCCGGCAA TGATGCTTGC GCTGTCTTAC GGTGACGCTG ATTTCACCGT ACATGCCTGG
GAACAGTTGC ACGCCTCTTT TTATGCCAAG GCGGGCGGCG ACGATACGAT GGTTAAAGTC
GGCGCTATTA TGCCCGGTGT TCTTCAAGGC TACATGATCG ACAAGAAAAC GGCTGATCAG
TACAAGATCA CTTCCGTCGA AGACCTGAAA AAGCCGGAAA TCGCCAAGCT GTTCGACAGC
AATGACGACG GTAAAGCCGA TATGACCGGC TGCAACCCTG GCTGGGGCTG CGAGGTTCTC
GTCGAGCACC ATATGAAAGC GTACGGCCTT GAAAAAACCG TTACTGACAA CCGCGGCTCC
TACTTCGCTC TCATGGCTGA CACCATCGCT CGCTACCAGC AGGGCAAGCC GATTCTTTAC
TTCACCTGGG TTCCGCAATG GATTTCCAGC GTGCTGATCG AGGGGCGGGA TGTGGTCTGG
CTGACCGTTC CCAAGACCGA TCTGCCGGGC GGGAAAAACG ACGTCGATAC GACGTATAAA
GGCAAAAACC TGGGCTTCGC GGTCGATACT GTCCGGGCCG TTCTGAACAA AGAGTTCGCC
GAAAAGAACC CCGTGGCGGT GAAGTTTCTC TCCGAGATGC AAATCACCAC CGATGACGAA
AGTGCTCAGA ACCTGAAAAT GCACAACGGC GAAAACTCGG CTGCGGACAT CAAGCGCCAT
GCGGCTGAAT GGATTGCCGC TCACCGTGCC GCCTACGATG GATGGCTGGC CGATGCACGC
GCCGCTGCGA GGAAATAG
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| Protein sequence | MTVLALALSP LMASAAQEPG KGVSITPIFP SIAEERFRGE IAMAGLKELG YKVEQPKETD
YPAMMLALSY GDADFTVHAW EQLHASFYAK AGGDDTMVKV GAIMPGVLQG YMIDKKTADQ
YKITSVEDLK KPEIAKLFDS NDDGKADMTG CNPGWGCEVL VEHHMKAYGL EKTVTDNRGS
YFALMADTIA RYQQGKPILY FTWVPQWISS VLIEGRDVVW LTVPKTDLPG GKNDVDTTYK
GKNLGFAVDT VRAVLNKEFA EKNPVAVKFL SEMQITTDDE SAQNLKMHNG ENSAADIKRH
AAEWIAAHRA AYDGWLADAR AAARK
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