Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_06178 |
Symbol | |
ID | 5558184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009784 |
Strand | - |
Start bp | 1356954 |
End bp | 1357883 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640910652 |
Product | glycine betaine/L-proline ABC transporter glycine betaine/L-proline-binding |
Protein accession | YP_001448297 |
Protein GI | 156977391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAA TCTTTTCATC TATCGCGCTG AGTGCAGTAG CGACAGGTGC TTACGCTAAC CAATGTGAAA CCGTTCGATT TGCCGATGTA GGCTGGACGG ACATTACAGC GACCACTGCT GTTACCTCTG AACTGTTAAA AGGCTTGGGC TACAAAACCA AGACCGATCT TCTGTCTGTA CCAGTGACGT ACTCTTCAAT GGCAAACGGC GACATTGACG TATTCCTAGG TAACTGGATG CCAACCATGG AAGGCGATAT CGCCAAGTAC CGTGAAGCTG GCACAGTGGA AACCGTTCGC GCAAACCTTG AAGGCGCAAA ATACACACTA GCTGTGCCAA AGTACGTGTA TGACGCTGGC GTGAAAAGCT TTGCTGACTT GGCAAAAAAT GCTGACAAAT TTAAAGACCG CATCTACGGG ATTGAGCCGG GCAACGATGG CAACCGTTTG ATCCAAGATA TGATCGACAG CGATGCATTC GGCTTGAAAG ACTTCAGCCT AGTGGAATCA AGCGAAGCGG GCATGGTGTC TCAAGTGTCT CGTGCAGTGC GCCGTAACCA ATGGATCGTT TACCTAGGTT GGGCTCCGCA CCCAATGAAC AGCAATGTGG AGATGGAATA CCTATCTGGC GGTGACGACT TCTTTGGTCC TAACTACGGT GGTGCAAATG TCTACACCAA TGTGCGCCAA GACTACCTAT CTGAGTGTCA AAACGTGGGT CAACTGCTTA AGAATCTAGA GTTCAGCTTA GAGATGGAAA ACCAGTTGAT GGAAGCGATT CTGAATCAAA AACAAAAGCC AGCGAAAGCA GCGCAAGAAT GGTTGAACGC TAACCCACAA CAACTTGAAG CGTGGCTAGA AGGCGTTAAG ACGCTGGACG GCAAAGACGC AAAACAAGCG ATTACTTCTT ACCTAAAAAC AAACGCTTAA
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Protein sequence | MTKIFSSIAL SAVATGAYAN QCETVRFADV GWTDITATTA VTSELLKGLG YKTKTDLLSV PVTYSSMANG DIDVFLGNWM PTMEGDIAKY REAGTVETVR ANLEGAKYTL AVPKYVYDAG VKSFADLAKN ADKFKDRIYG IEPGNDGNRL IQDMIDSDAF GLKDFSLVES SEAGMVSQVS RAVRRNQWIV YLGWAPHPMN SNVEMEYLSG GDDFFGPNYG GANVYTNVRQ DYLSECQNVG QLLKNLEFSL EMENQLMEAI LNQKQKPAKA AQEWLNANPQ QLEAWLEGVK TLDGKDAKQA ITSYLKTNA
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