| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2363 |
|---|
| Symbol | |
|---|
| ID | 5870152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 2641751 |
|---|
| End bp | 2642767 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641547487 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_001668599 |
|---|
| Protein GI | 167033368 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAC TTCCAATGCT GCTGGCCAGC CTGCTGCTCG CTGTCAGCCT GGCCGCCACC
GACAGCGCCG CCTCGGCAGA ACGCAGCGAG CCCATCCACT TTGGCGCCAT CGGCTGGGAA
AGCGGTGCCC TCACCACCGA AATCCTGCGG CTGATCGTGG AGCGCGGCTA CGGCTACACC
ACCGACACCC TGCCCGGTAG CACCGTCAGC ATGGAGGTGG CCCTGGCGCG CAATGACCTG
CAAGTGATCG CCGAGGAGTG GGCCGGGCGC AGCCCTGCCT GGGTCAAGGC CGAACAGGCC
GGCCAGGTGT TCGCGCTGGG CGATACGGTG AAAAATGCAG AGGAAGGTTG GTGGGTGCCG
GCCTATGTGA TCGAAGGCGA TGCCGCACGC AAACTGAAAC CCTTGGCACC CCAGTTGCGC
AGTGTCGAGG ACCTCAAGCG TTACCCGCAG GTTTTCCGCG ACCCCGAGTC GCCCGACAAG
GGCCGTTTCC TGAACAGCCC CAGCGGCTGG ACGTCTGAAA CGGTCAACAG CCAGAAGCTC
AAGGCCTACG GTTTGAATGA CCTCTATACC AACTTCCGCA GTGGCTCCGG CGCGGCGATG
GACGCCGAGA TCGGCTCGGC TATCCGTCGT GGCCAACCGG TGCTGTTTTA CTACTGGAAC
CCGACCCCGC TGATGGGGCG CTACAAGCTT GTACGCCTGC AAGAGCCACC GTTCAATGCC
CAGGCCTGGG CCACCCTCAC CGATGCCGGC AACCCCAACC CGAAGGGCAG CCGGTCGCTG
CCGGCGAAGT TGTCGATTGG CGTGTCCAAG GTCTTTCGCG ATAGCTACCC GGACCTGGTC
AGCGTGTTCG AACGGGTGGA CCTGCCCATC GATCGCCTGA ACCAGGCCTT GGCCGCAATG
AGCGAAAAAC GCACGCCACC GCGCGACGCA GCCCTGACCT TCCTGCGCGA TAACCCTGAT
GTGTGGAAAA CCTGGCTGCC TGCGGACATC GCCGCCAAGG TCGAGGCCAG CCTGTGA
|
|---|
| Protein sequence | MNRLPMLLAS LLLAVSLAAT DSAASAERSE PIHFGAIGWE SGALTTEILR LIVERGYGYT
TDTLPGSTVS MEVALARNDL QVIAEEWAGR SPAWVKAEQA GQVFALGDTV KNAEEGWWVP
AYVIEGDAAR KLKPLAPQLR SVEDLKRYPQ VFRDPESPDK GRFLNSPSGW TSETVNSQKL
KAYGLNDLYT NFRSGSGAAM DAEIGSAIRR GQPVLFYYWN PTPLMGRYKL VRLQEPPFNA
QAWATLTDAG NPNPKGSRSL PAKLSIGVSK VFRDSYPDLV SVFERVDLPI DRLNQALAAM
SEKRTPPRDA ALTFLRDNPD VWKTWLPADI AAKVEASL
|
|---|
| |