| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Csal_1901 |
|---|
| Symbol | |
|---|
| ID | 4026814 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chromohalobacter salexigens DSM 3043 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007963 |
|---|
| Strand | - |
|---|
| Start bp | 2159271 |
|---|
| End bp | 2160155 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637967095 |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_573952 |
|---|
| Protein GI | 92114024 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.135733 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACGCA CTTCACTGAC GAAAGCCGTA CGTTGCGGGG CCCTGATGAT GGCTGCCGGC
GCAGGGCTCA ATGCGGGCAT CGCACAAGCG CAGGACAGCA AGGGTGACAT CACGCTCGCG
TACGTCGAGT GGTCTTCCGA AGTCGCTTCC ACCAACGTGG TGCGCGCGGT GCTCGAGGAG
CAAGGCTACA ACGTCGAGAT GTCGTCACTT TCCGCCGCTG CCATGTGGCA GGCCGTGGCG
TATGGCGACG CCGACGGCAT GGTCGCGGCA TGGTTGCCGT CGACGCATGA ACAGTACCTC
AACGAGGTCG GCGACAAGGT CGAAGACCTG GGCGCCAACC TCAACGGTAC GAAGTTGGGT
CTCGTCGTCC CTTCTTATAC CGATATCTCG TCCATCGATG AACTCGATGA CAAGGCGGAT
ATGGTCAACG ACGAGATCGT CGGCATCGAT CCGGGCGCCG GTCTGATGAA CCTGACCGAA
AAGGCCATCG AGGAATACGA TCTCGGCGAC GAGATCAACC TGCAGTCGGG TAGTGGCGCC
ACGATGACGG CGGCGCTGGA CAGCGCCATC AAGAACGACG AGGACATCGT CGTCGCCGGC
TGGACACCGC ACTGGATGTT CGCGCGCTGG GACCTCAAGT ATCTCGAGGA TCCGAAGAAC
GTCTATGGTG GTGCGGAGCA CATCAACACC GTGGTGCGCC AGGGGCTGAA GGAAGATATG
CCGGAAGCCT ATGCGATCCT CGACAACTTC GAGTGGACGC CGGAGCAGAT GGGCGAAGTC
ATGCTCATGA ACCAGGAAGA AGGCTCCGAC CCGTACGAAA ACGCCAAGAA GTGGGTGGAA
AACCATCCCG ATGTCGTCGC CGAGTGGGTG AACGGCGACA GCTGA
|
|---|
| Protein sequence | MTRTSLTKAV RCGALMMAAG AGLNAGIAQA QDSKGDITLA YVEWSSEVAS TNVVRAVLEE
QGYNVEMSSL SAAAMWQAVA YGDADGMVAA WLPSTHEQYL NEVGDKVEDL GANLNGTKLG
LVVPSYTDIS SIDELDDKAD MVNDEIVGID PGAGLMNLTE KAIEEYDLGD EINLQSGSGA
TMTAALDSAI KNDEDIVVAG WTPHWMFARW DLKYLEDPKN VYGGAEHINT VVRQGLKEDM
PEAYAILDNF EWTPEQMGEV MLMNQEEGSD PYENAKKWVE NHPDVVAEWV NGDS
|
|---|
| |