| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2828 |
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| Symbol | |
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| ID | 5085106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 2878268 |
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| End bp | 2879269 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640484398 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001169019 |
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| Protein GI | 146278860 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.23634 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC GCATCGCTTC CGCCTGGCTT GCCGCGTCGC TTGCTGCCCT CGCCGCTCCG
GCTTGGGCGC AGGAGACGTG CGGCCGGATC AGCATCGCCG AGATGAACTG GGCCTCGGCC
GGGGTGGCGG CGCAGGTGGA CCGGATCATC CTCGAGGAAG CCTTCGGCTG CGACGTGGAG
CTGGTCACCG GCGACACGAT GCCGACCTTC ACCTCGATGA ACGAGAAGGG CGAGCCGGAC
ATGGCGCCCG AGATGTGGGT GAACGCGGTC CGCGCCCCGC TCGACGCCGC CGTGGAGGAG
GGCCGGCTGG TGATCGCGGC GCCCATCCTC GAGGAGGGCG GCATCGAGGG CTGGTGGATC
CCGCGCTATC TGGCCGAGGC CCATCCCGAG ATCGACAGCG TCAAGGCGGC GCTCGCCCGT
CCCGAACTGT TTCCCGCGCC CGAGGATCCC TCGGTCGGCG CCGTCCACAA CTGCCCGCCC
GGCTGGAACT GCCAGATCTC GACCGAGAAC CTCTTCCGGG CGCTCGATGC CGAGAGCCGC
GGCTTCACGC TCGTTGATAC CGGCTCTTCG GCGGGGCTCG ACGGCTCGAT CGCCAATGCC
TACGAGCGCA GGGCCGGCTG GTTCGGCTAC TACTGGGCGC CGACGGCGAT CCTCGGCAAG
TATGACATGG TGCGCCTGCC GTTTTCGGTG CCCCACGACA AGGCCGAATG GGACAGCTGC
ACCGCGGTGC CCGACTGCGC CGAGCCCAGT GTGAATGCCT ATCCGGTGTC CGAGGTCTTT
ACCGTCGTCA CCCCCGCCTT TGCCGAGAAG GCCGGCGTGG CCATGGACTA TGTCGGCGCG
CGCCGATGGA GCAACGGCAC CGTGGGCGCG GTGCTGGCCT GGATGGACGA GAACCAGGCC
ACGAACGAGG AGGCGGCGCG TCACTTCCTC GAAACCTACC CCGAGTTGTG GCGTGCCTGG
CTTCCGGCCG AGGCCGCCGA CCGGGTCGCC GCGGCGCTCT GA
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| Protein sequence | MTKRIASAWL AASLAALAAP AWAQETCGRI SIAEMNWASA GVAAQVDRII LEEAFGCDVE
LVTGDTMPTF TSMNEKGEPD MAPEMWVNAV RAPLDAAVEE GRLVIAAPIL EEGGIEGWWI
PRYLAEAHPE IDSVKAALAR PELFPAPEDP SVGAVHNCPP GWNCQISTEN LFRALDAESR
GFTLVDTGSS AGLDGSIANA YERRAGWFGY YWAPTAILGK YDMVRLPFSV PHDKAEWDSC
TAVPDCAEPS VNAYPVSEVF TVVTPAFAEK AGVAMDYVGA RRWSNGTVGA VLAWMDENQA
TNEEAARHFL ETYPELWRAW LPAEAADRVA AAL
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