| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPS_4933 |
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| Symbol | |
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| ID | 3520282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Colwellia psychrerythraea 34H |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003910 |
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| Strand | + |
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| Start bp | 5227001 |
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| End bp | 5227972 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637287372 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | YP_271572 |
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| Protein GI | 71279821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT CAATCCTACC AATAGCCGCT TTAATATTCA GTACTTATAT AATGCCAGCT
ACGGCACAAT CAGATTGCGG GGACATCACA ATAAGTGAAA TGAACTGGGC CTCAGGACAA
TTGGTAACAT CGGTATCCAA ATTCATTTTA GAACAGGGAT ACGGCTGTAA CGTTCAAACC
ATCCCGACAT CTACCGTTCC TTCCGTTGTA TCTCTTGCTG AAACGGGTAA ACCTGACATC
ATTACCGAAC TATGGATCAC CGCAGTGCCT CTGTATAAAG AGCTTGAAAA ACAGGGCAAA
GTAATCACGG CAACTAAGGT TCTTTCTGAT GGTGGTACTA ACGGTTGGTG GATTCCGAAA
TACCTTGCCG ACAAACATCC GGAGCTGAAA ACCATAGAAG GCGTCCTGGC TAACCCCGAA
CTGGTTGGCG GTCGTTTCCA TAATGCACCA AACGGCTGGG GCATGAGAAC CACGAACGAC
AACTTGATCA AGGCATTCAA CTTTGCTGGC AATAAGATGG ATGTTTTCAA CCATGGCTCA
GGTGAAACAC TGGCCGCCTC TATTGCATCA GCTTACGACG CCCATGAACC ATGGTTCGGC
TACTACTGGG CACCGACGTC TGTCTTAGGT AAGTATGAAA TGGTTGCCGT AGATATGGGA
GCTTTCGATG AGACAGCTTA TGCCTGCGCT GAAAGTAAAG AATGTTCTAA TCCGCAAAAG
ACCTCTCTGC CAAGCGCCAC GGTAGTGACT GCAATAACAA CCGATCTGGC TACACGTGAG
CCAGAAGTGC TGAACCTGAT GAAGAAGCTC TCCTTTACTA ACAAGCAGAT GAGTCAATTA
CTGGCTTGGC AAGAAGCTAA TAAATCCTCT TCTGAAGAGG CTGCAGTTCA TTTTATTACC
ACCCAACAGG ATATCTGGTC AGCGTGGCTC AGTGAAGACG CCCGTAAAAA CCTCGCGTCA
CTGCTGAAAT AA
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| Protein sequence | MKKSILPIAA LIFSTYIMPA TAQSDCGDIT ISEMNWASGQ LVTSVSKFIL EQGYGCNVQT
IPTSTVPSVV SLAETGKPDI ITELWITAVP LYKELEKQGK VITATKVLSD GGTNGWWIPK
YLADKHPELK TIEGVLANPE LVGGRFHNAP NGWGMRTTND NLIKAFNFAG NKMDVFNHGS
GETLAASIAS AYDAHEPWFG YYWAPTSVLG KYEMVAVDMG AFDETAYACA ESKECSNPQK
TSLPSATVVT AITTDLATRE PEVLNLMKKL SFTNKQMSQL LAWQEANKSS SEEAAVHFIT
TQQDIWSAWL SEDARKNLAS LLK
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