Gene Spro_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0802 
Symbol 
ID5603738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp895890 
End bp896855 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content56% 
IMG OID640936313 
Productsubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_001477036 
Protein GI157369047 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0332812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACAC GACACAAATT ATGGATACCG CTGATCGCGC TCGGGCTGAT GACAGGCAGC 
CTGTCCGCGC GCGCAGCAGG CTGGTGCGAG TCCGGCAAGC CGGTCAAATT CGCCGGACTC
AACTGGGAAA GCGGCATGCT GCTGACCGAC GTCATGCAAT ATGTGCTGCA AAAGGGTTAC
GACTGTAAAA CCGACGCGCT GCCGGGTAAC TCCATCACCA TGGAGCAGGC AGTCGGCACC
AACGACATTC AGGTGTTCGC CGAAGAGTGG ATTGGCCGCA GCGAAGTCTG GAACAAGGCA
GAGAAAGCCG GCAAAGCGGT CAGCGTGGGT GCGCCGATTG TCGGCGCGGT TGAAGGCTGG
TACGTGCCGC GCTATGTGAT TGAAGGCGAT GCCAAACGCA AGTTGAAACC GCTGACGCCG
GATCTGAAAA GCATCCCGGA TCTCGCCAAA TATGTGCAGG TATTTCGCGA TCAGGAAGAA
CCGGACAAAG GCCGTTTTTA CAACTGCCCG GCCGGCTGGA CCTGCGAACT GGATAACACC
GCGATCCTCA AAAAATTCAA GCTGGACGAC AAGTTCACCA ACTTCCGCCC TGGCACCGGC
CCGGCACTGG ATACCGAGAT CCTCTCCAGC TACCGTCGCG GCGAACCTAT CCTGTTCTAC
TACTGGTCAC CGACCCCAAT CATGGGCCAG CTCGATCTGG TGAAACTGGA AGAACCGGGC
GTGGACAAGA ACATCCACAT CAAGGTCGGT ATTTCCAGCG TGTTTAACCA GCAGGCGCCT
GAACTGGTCC AGGTGTTGTC AAAAGTGAAT CTGCCGCTTG ATCTGATTAA CCAGAATCTG
GCGCGCATGA GCAAGGAACG CATCAGCTCA GAGAAGCTGG CGCTGGAGTT CTTCAAGCAG
CACCCGGAAA TCTGGCAACA GTGGGTCAGC GAAGACGCAG CGAAAAAAAT TCAGGCCTCC
TTGTAA
 
Protein sequence
MQTRHKLWIP LIALGLMTGS LSARAAGWCE SGKPVKFAGL NWESGMLLTD VMQYVLQKGY 
DCKTDALPGN SITMEQAVGT NDIQVFAEEW IGRSEVWNKA EKAGKAVSVG APIVGAVEGW
YVPRYVIEGD AKRKLKPLTP DLKSIPDLAK YVQVFRDQEE PDKGRFYNCP AGWTCELDNT
AILKKFKLDD KFTNFRPGTG PALDTEILSS YRRGEPILFY YWSPTPIMGQ LDLVKLEEPG
VDKNIHIKVG ISSVFNQQAP ELVQVLSKVN LPLDLINQNL ARMSKERISS EKLALEFFKQ
HPEIWQQWVS EDAAKKIQAS L