Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2583 |
Symbol | |
ID | 5323451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2684111 |
End bp | 2685145 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640791526 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001328248 |
Protein GI | 150397781 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.201596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATCA GCACAATGAA ACTCACCGTC GCGGCAGCCG GCCTGATGCT GGCGGCATCC GCCGGCGGCG CCAATGCTTC CTATTGCGGC GATGGCAAGA CCGTAACCTT CGCCGGCATA GATTGGGAAA GCGGCGCCTT CATTACCGAG GTCATGAAAA CGATCCTTTC CAAGGGATAC GACTGCCAGG TCGACTCGAT TCCCGGCAAT TCCGTAACTC TCGAGCAGGC AACGGCCAAT AACGACGTTC AGATTTTCGC CGAGGAATGG CTCGGCCGTT CGGACATCTG GAACAAGGCG GTGGAAGAGA AGAAGGTGGT TGCCGTCGGC AAGACCTTTG TAGGCGCCAG CGAAGGCTGG TTCGTGCCGG ACTATGTCGT CAAGGGCGAT CCCGCTCGCA ATATCGAACC CAAGGCGCCG GACCTGAAAA GCGTATCCCA ACTTGCCGAC CCGAAAATCG CCGAGATCTT CGCTGATCCG GAGGAACCGT CCAAGGGCCG CTTCCTGAAC TGCCCTTCCG GCTGGACCTG CGAGGGCGTG AGCACGGCCA AGCTCGAGGC CTACAAGCTT GGCGAGTCCT ACGTGAACTT CCGCCCGGGG ACGGGAACGG CGCTCGATGC GGCGATTACC TCTGCCTATC TCCAGGGAGA GCCGATCCTC TTCTATTATT GGTCGCCGAC CGCGATCATG GGTAAATACA AGCTGATCCA GCTCGAAGAG CCGCCCTATA ACGAAGCCTG CTGGAAAGAA CTGAGCAGTG CCAACGGCAA GCGTGACGAA GGCTGCGCCT TTCCCTCCGT CGACGTCTCT TATGGCGTGA ACAGCACCTT CGCTTCCGAG GCGCCGGAAA TCATCGAGAT CCTGGAAAAG GCAACTTTTC CGCTCGAGGA GGTCAATGCC AGCCTCGCCT ATATGACGGA TAATAAGGTC GATGCGACGG CAGCCGCCGC GCAGTTCCTG AAAGCCAAGG GCGACATCTG GGGCAAGTGG GTCTCGGACG AGGCACGCGG CAAAATCGAA GCTGGCCTCG AATAA
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Protein sequence | MSISTMKLTV AAAGLMLAAS AGGANASYCG DGKTVTFAGI DWESGAFITE VMKTILSKGY DCQVDSIPGN SVTLEQATAN NDVQIFAEEW LGRSDIWNKA VEEKKVVAVG KTFVGASEGW FVPDYVVKGD PARNIEPKAP DLKSVSQLAD PKIAEIFADP EEPSKGRFLN CPSGWTCEGV STAKLEAYKL GESYVNFRPG TGTALDAAIT SAYLQGEPIL FYYWSPTAIM GKYKLIQLEE PPYNEACWKE LSSANGKRDE GCAFPSVDVS YGVNSTFASE APEIIEILEK ATFPLEEVNA SLAYMTDNKV DATAAAAQFL KAKGDIWGKW VSDEARGKIE AGLE
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