| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_0362 |
|---|
| Symbol | |
|---|
| ID | 3713410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 413509 |
|---|
| End bp | 414477 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | substrate-binding region of ABC-type glycine betaine transport system |
|---|
| Protein accession | YP_346095 |
|---|
| Protein GI | 77456590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.376501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGA ACAAGACCCT GCTGACCACC TTGCTTTCCA TGGGCCTGCT GGCCAGCGCC
GGCGCGACCC AGGCCGCCGG CTGGTGCGAG TCCGGCAAAC CGGTGAAATT CGCCGGCCTG
AACTGGGAAA GCGGCATGCT GCTGACCGAC GTTCTGCAAG TGGTGCTGGA AAAAGGTTAC
GACTGCAAGA CCGACAGCCT GCCGGGCAAC TCCATCACCA TGGAGAACGC CCTGAGCAGC
AACGACATCC AGATCTTCGC CGAAGAATGG GTCGGCCGCA GCGAGGTCTG GAACAAGGCC
GAGAAGGCCG GCAAGGTCGT CGGTGTCGGC GCCCCGGTGG TGGGTGCGAT CGAAGGCTGG
TACGTGCCGC GCTACGTGAT CGAAGGCGAC GCCAAGCGCA AACTCGAAGC CAAGGCGCCG
GACCTGAAAA ACATTGCCGA CCTGGGCAAA TACTCGGCCA TCTTCAAGGA CGCCGAAGAA
CCTTCCAAGG GCCGCTTCTA CAACTGCCCG GCCGGCTGGA CCTGCGAGCT GGACAACAGC
GAAATGCTGA AAAGCTACGG TCTGGAAAAC AGCTACACCA ACTTCCGTCC GGGCACAGGT
CCAGCGCTGG ATGCGGCTGT GCTGTCGAGC TACAAGCGTG GCGAGCCGAT CCTGTTCTAC
TACTGGTCGC CAACCCCGCT GATGGGCCAG ATCGACGCGG TGAAACTGGA AGAGAAACCG
GGCGTCGACA AGACCGTGAC CATCAAGGTC GGCCTGTCCA AGACCTTCCA CGAGCAAGCG
CCGGAACTGG TGGCCGTGCT GGAAAAGGTC AACCTGCCGA TCGACCTGCT GAACCAGAAC
CTGGGCCGCA TGGCGAAGGA ACGTATCGAG TCGCCAAAAC TGGCGAAAAT CTTCCTCAAG
GAACATCCTG AAGTCTGGCA CGCGTGGGTG AGTGAAGACG CTGCCAAGAA AATCGACGCG
GCGCTGTAG
|
|---|
| Protein sequence | MKSNKTLLTT LLSMGLLASA GATQAAGWCE SGKPVKFAGL NWESGMLLTD VLQVVLEKGY
DCKTDSLPGN SITMENALSS NDIQIFAEEW VGRSEVWNKA EKAGKVVGVG APVVGAIEGW
YVPRYVIEGD AKRKLEAKAP DLKNIADLGK YSAIFKDAEE PSKGRFYNCP AGWTCELDNS
EMLKSYGLEN SYTNFRPGTG PALDAAVLSS YKRGEPILFY YWSPTPLMGQ IDAVKLEEKP
GVDKTVTIKV GLSKTFHEQA PELVAVLEKV NLPIDLLNQN LGRMAKERIE SPKLAKIFLK
EHPEVWHAWV SEDAAKKIDA AL
|
|---|
| |