Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oant_2920 |
Symbol | |
ID | 5381828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ochrobactrum anthropi ATCC 49188 |
Kingdom | Bacteria |
Replicon accession | NC_009668 |
Strand | + |
Start bp | 217304 |
End bp | 218230 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640835596 |
Product | substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_001371457 |
Protein GI | 153010243 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGCC TATTTCTTTT GCTTGCAGCA AGCGTCGCCA GCGTGCAGGC GCATGCCGCT GAAGGCGCAA ACTGCAAGGC ACCCAAATTC TCCGATGTCG GCTGGACCGA CATTACTGCA ACGACGGCGC TCGCTTCTCT GCTGCTTGAA AAAGCCGGAT ACGAGCCGCA GACAACCATC CTTTCCGTGC CGGTCACCTT CCAGTCGCTG GAAAATGGAC AGATCGATAT TTTCCTCGGC AACTGGATGC CGCTTCAGGA AGAAGCGCGC AAACCCTATC TTGAAGGCAA GAAGATCGAG CAGGCTGGCG TCAATCTCGA AGGCGCAAAG ATCGGTCTTG CTGCGACGGG CAAGGACCTT GGCATCAAGA ATTATGCCGA TATCGCAAAA TTCAAGGACC AGCTTGGCGG CAAGATTTAC GGCATCGAGG CTGGCAGCAG CGCAAACGCC ACGATCCAAT CGATGGTCGA GCAGGACAAA TTCGGCCTGA AGGATTTCCA GCTCGCGGAA TCGAGCGAGC AGGCCATGCT CTCGCAGGTT CAAAATGCGG TGCGCAAGGA TGAGCCCGTT GTGTTCTTTG CCTGGACGCC GCATCCAATG AACATTCGCT ACAAGCTCAC CTATCTGGAA AATGGTGAAA ACCTGTTCGG ACCGGATGAT GGCGCGGCAA CCGTCGAAAC ACTGACCCGC AAGGGCTATG CAACCGACTG CCCCAACGTC TCGCGCTTTG TGTCGAACCT GAAGTTCAAC ACGGATATGG AAAGCACGAT GATGAACATG ATCCTGAACG ATGGCATGGA AGCCAAGGAT GCCGTCACGA AATGGATCAA GGAGAACCCG GCGCAGCTTG ATGCGTGGCT TGACGGCGTG ACCACTTTCG ACGGCAAACC AGCACTTGCT GAGGTGAAGT CGGGGCTGGG CCTTTAA
|
Protein sequence | MKRLFLLLAA SVASVQAHAA EGANCKAPKF SDVGWTDITA TTALASLLLE KAGYEPQTTI LSVPVTFQSL ENGQIDIFLG NWMPLQEEAR KPYLEGKKIE QAGVNLEGAK IGLAATGKDL GIKNYADIAK FKDQLGGKIY GIEAGSSANA TIQSMVEQDK FGLKDFQLAE SSEQAMLSQV QNAVRKDEPV VFFAWTPHPM NIRYKLTYLE NGENLFGPDD GAATVETLTR KGYATDCPNV SRFVSNLKFN TDMESTMMNM ILNDGMEAKD AVTKWIKENP AQLDAWLDGV TTFDGKPALA EVKSGLGL
|
| |