| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4904 |
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| Symbol | |
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| ID | 6113894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5417067 |
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| End bp | 5418011 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641624716 |
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| Product | choline ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001751749 |
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| Protein GI | 170724061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.20164 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAGCT TGATCCGCCG CAGCCTGTTG TCACTTGCCC TGAGCAGCAT CGTTGCCACA
CCGCTTTTCG CCGCAGAACC TGCGGCCTGC AAGAACGTGC GCCTTGGCGT GGTCAACTGG
ACCGACGTCA TCGCCACCAG CGCCATGGCG CAAGTGTTGC TCGACGGCCT GGGTTACCAG
ACCAAACAGA CCAGCGCCTC GCAGCAGATC ATCTTTGCCG GCATCCGCGA CAAGCGCCTG
GACATGTTCC TGGGTTACTG GAACCCGATC ATGACCCAGA CCATCACACC GTTCATCGAT
GCCCAGCAGG TCAAGGTGCT CGACGCACCC AGCCTGGAAG ATGCCCGGGC CACCTTGGCC
GTACCCAAGT ACCTGGCCGA CAAAGGCCTG AAGAGCTTCG CAGATATCCA CAAGTTCGAG
AAAGAGCTGG GCGGCAAGAT CTATGGCATC GAGCCCGGGT CCGGCGCCAA CACTCAGATC
AAGGCGATGA TCGCCAAGAA CCAGTTCGGC CTGGGCAAGT TCCAGCTGGT CGAGTCCAGC
GAGGCCGGCA TGCTCGCCGC AGTCGACCGC GCCGTGCGCC GCAAGCAGGC CGTGGTGTTC
TTCGGCTGGG CGCCGCACCC GATGAACGTG AACATCGACA TGGTCTACCT GAGCGACAGC
CAGGATGCCC TGGGCCCTGA CGAAGGCCGC GCCACGGTGT GGACCGTCAC CGCGCCGGAC
TACGCCCAAC GCTGCCCCAA CGCCCATCGC CTGCTGGCCA ACCTGAAATT CAGCGCCGAA
GACGAGAGCC GCATGATGCA GCCGCTGCTT GACCACAAGG ACGCGCTGGA GTCGGCCCGC
CAATGGCTCA AGGACCACCC CGAGGACAAG GCGCGCTGGC TTGAAGGGGT GACCACCTTC
GATGGCAAGC CCGCGGCGGA CAACCTCAAG CTCACCGCCA ACTGA
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| Protein sequence | MHSLIRRSLL SLALSSIVAT PLFAAEPAAC KNVRLGVVNW TDVIATSAMA QVLLDGLGYQ
TKQTSASQQI IFAGIRDKRL DMFLGYWNPI MTQTITPFID AQQVKVLDAP SLEDARATLA
VPKYLADKGL KSFADIHKFE KELGGKIYGI EPGSGANTQI KAMIAKNQFG LGKFQLVESS
EAGMLAAVDR AVRRKQAVVF FGWAPHPMNV NIDMVYLSDS QDALGPDEGR ATVWTVTAPD
YAQRCPNAHR LLANLKFSAE DESRMMQPLL DHKDALESAR QWLKDHPEDK ARWLEGVTTF
DGKPAADNLK LTAN
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