| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0905 |
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| Symbol | |
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| ID | 8418725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1072405 |
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| End bp | 1073256 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037475 |
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| Product | Substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_003197774 |
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| Protein GI | 258405032 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.121649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAAAAAC TGACGAAAAT TTTTGCACTC GTTTTGTTGT TGACGTTTAT TGCAGTTCCT
GGTTTTGCCC AGGACAAGGA TGTGGAGATC GCTTACGTTG AGTGGTCCTG CGCTACAGCC
AGCAGTAACG TAGTCAAAGC TGTACTTAAT GAAGAAATGG GCTATGATGC CGATATCGTA
TCGGTTACTG CCGCGGCGAT GTGGCAGGCC ACTGCCTCAG GTGATGTCGA TGGGTTTGTG
ACCGCGTGGC TCCCGGTCAC CCACGGCCAT TATTACGACA AGGTCAAGGA TGAGGTCGAA
AATCTTGGCC CGCTGGCTAC CGGCGCCAAG ATCGGTCTTG TCGTTCCGGA ATATGTGGAT
ATCGAATCCA TCGCTGACCT CGATGACCAT GCCGCCAAAT TCGACGGCAC CATCACTGGC
ATCGACCCGG GCGCGGGCAT CATGTCCAAG AGCGAGAAGG CCCTGGAGGC TTATAATCTG
GACAACATGA CCCTCGGCGA GGGCAGCGGC GCAACCATGA CCGCCATGCT CTCCGAGGCG
GTGGAAAACG AGGATTGGAT TGTGGTCACC GGCTGGAGCC CGCACTGGAA GTTCGGTCGC
TGGGACCTGA AATACCTGGA AGATCCGAAG AATGTCTACG GTGGTTCCGA AGACATCACG
ACCATCGTGC GCGAGGATCT CAAGGAAGAC ATGCCTGAAG TGTACGCCTT CCTCGATCGT
TTCTCCTGGG ACCTGAGCGT CATGCAGGGC CTGATGGCCA AAAATCAGGA AAACGGCAAG
CCTTACGAAA ACGCCAAGGA ATTCATCAAG AACCACCCTG AGCTGGTGGA CAAGTGGCTT
GGCCGGAGCT AG
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| Protein sequence | MQKLTKIFAL VLLLTFIAVP GFAQDKDVEI AYVEWSCATA SSNVVKAVLN EEMGYDADIV
SVTAAAMWQA TASGDVDGFV TAWLPVTHGH YYDKVKDEVE NLGPLATGAK IGLVVPEYVD
IESIADLDDH AAKFDGTITG IDPGAGIMSK SEKALEAYNL DNMTLGEGSG ATMTAMLSEA
VENEDWIVVT GWSPHWKFGR WDLKYLEDPK NVYGGSEDIT TIVREDLKED MPEVYAFLDR
FSWDLSVMQG LMAKNQENGK PYENAKEFIK NHPELVDKWL GRS
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