More than 300 homologs were found in PanDaTox collection
for query gene PA14_11180 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008463  PA14_11180  putative transcriptional regulator  100 
 
 
222 aa  446  1.0000000000000001e-124  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0312289  normal 
 
 
-
 
NC_009656  PSPA7_1027  LuxR family transcriptional regulator  82.43 
 
 
222 aa  363  1e-100  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1538  LuxR family transcriptional regulator  44.13 
 
 
288 aa  155  5.0000000000000005e-37  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0942  LuxR family transcriptional regulator  43.66 
 
 
235 aa  152  2.9999999999999998e-36  Burkholderia mallei NCTC 10247  Bacteria  normal  0.232709  n/a   
 
 
-
 
NC_006349  BMAA1366  LuxR family transcriptional regulator  43.66 
 
 
235 aa  152  2.9999999999999998e-36  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2465  LuxR family transcriptional regulator  43.66 
 
 
273 aa  152  2.9999999999999998e-36  Burkholderia pseudomallei 1710b  Bacteria  normal  0.54611  n/a   
 
 
-
 
NC_008784  BMASAVP1_0350  LuxR family transcriptional regulator  43.66 
 
 
259 aa  152  2.9999999999999998e-36  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0630  LuxR family transcriptional regulator  43.66 
 
 
273 aa  152  2.9999999999999998e-36  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0768185  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1199  LuxR family transcriptional regulator  43.66 
 
 
235 aa  152  2.9999999999999998e-36  Burkholderia pseudomallei 1106a  Bacteria  normal  0.791762  n/a   
 
 
-
 
NC_009075  BURPS668_A1273  LuxR family transcriptional regulator  43.66 
 
 
273 aa  152  4e-36  Burkholderia pseudomallei 668  Bacteria  normal  0.0925384  n/a   
 
 
-
 
NC_010086  Bmul_3818  LuxR family transcriptional regulator  41.26 
 
 
264 aa  145  3e-34  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.0000221432 
 
 
-
 
NC_007511  Bcep18194_B0930  LuxR family transcriptional regulator  39.56 
 
 
246 aa  143  2e-33  Burkholderia sp. 383  Bacteria  normal  0.6214  normal 
 
 
-
 
NC_008061  Bcen_3585  LuxR family transcriptional regulator  40.27 
 
 
251 aa  143  3e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.976883  n/a   
 
 
-
 
NC_008543  Bcen2424_4782  LuxR family transcriptional regulator  40.27 
 
 
251 aa  143  3e-33  Burkholderia cenocepacia HI2424  Bacteria  normal  0.134366  normal 
 
 
-
 
NC_010515  Bcenmc03_5501  LuxR family transcriptional regulator  40.27 
 
 
242 aa  143  3e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.926313 
 
 
-
 
NC_008391  Bamb_4166  LuxR family transcriptional regulator  41.44 
 
 
243 aa  140  1.9999999999999998e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4689  LuxR family transcriptional regulator  41.15 
 
 
243 aa  138  4.999999999999999e-32  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C3366  LysR family transcriptional regulator  33.82 
 
 
227 aa  115  6.9999999999999995e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.857101 
 
 
-
 
NC_011094  SeSA_A3299  LysR-family transcriptional regulator  33.33 
 
 
227 aa  113  2.0000000000000002e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.212015  normal 
 
 
-
 
NC_011149  SeAg_B3294  LysR-family transcriptional regulator  33.33 
 
 
248 aa  113  3e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.42203  n/a   
 
 
-
 
NC_011080  SNSL254_A3373  LysR family transcriptional regulator  33.33 
 
 
227 aa  112  4.0000000000000004e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.322322  normal 
 
 
-
 
NC_011205  SeD_A3468  LysR family transcriptional regulator  33.33 
 
 
248 aa  112  4.0000000000000004e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0530935  normal 
 
 
-
 
NC_009832  Spro_0618  LuxR family transcriptional regulator  33.33 
 
 
215 aa  111  8.000000000000001e-24  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0228  LuxR family transcriptional regulator  26.4 
 
 
238 aa  68.6  0.00000000007  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_3596  transcriptional regulator, LuxR family  49.25 
 
 
178 aa  62  0.000000006  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.445896  n/a   
 
 
-
 
NC_011145  AnaeK_3528  transcriptional regulator, LuxR family  49.25 
 
 
178 aa  62  0.000000006  Anaeromyxobacter sp. K  Bacteria  normal  0.993919  n/a   
 
 
-
 
NC_009675  Anae109_3555  response regulator receiver protein  45.07 
 
 
176 aa  62  0.000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0548987 
 
 
-
 
NC_007760  Adeh_3447  LuxR family transcriptional regulator  47.14 
 
 
175 aa  60.8  0.00000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_3378  LuxR family transcriptional regulator  38.05 
 
 
249 aa  59.7  0.00000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.394495  normal  0.0844825 
 
 
-
 
NC_009439  Pmen_2538  regulatory protein, LuxR  45 
 
 
907 aa  58.5  0.00000009  Pseudomonas mendocina ymp  Bacteria  normal  0.896851  normal  0.0163895 
 
 
-
 
NC_013501  Rmar_1005  two component transcriptional regulator, LuxR family  48.44 
 
 
211 aa  57  0.0000002  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  43.66 
 
 
219 aa  56.6  0.0000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_011769  DvMF_1879  ATP-dependent transcriptional regulator, MalT-like, LuxR family  44.74 
 
 
839 aa  57  0.0000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_3188  LuxR family transcriptional regulator  50 
 
 
368 aa  56.2  0.0000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0110301  n/a   
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  39.58 
 
 
209 aa  56.2  0.0000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009901  Spea_0633  LuxR family transcriptional regulator  39.76 
 
 
224 aa  55.5  0.0000006  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0829  two component LuxR family transcriptional regulator  36.45 
 
 
209 aa  55.8  0.0000006  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00236991  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  44 
 
 
228 aa  55.5  0.0000006  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2539  regulatory protein, LuxR  46.43 
 
 
904 aa  55.5  0.0000006  Pseudomonas mendocina ymp  Bacteria  normal  0.50873  hitchhiker  0.00362349 
 
 
-
 
NC_009656  PSPA7_3548  transcriptional regulator  39.51 
 
 
924 aa  55.1  0.0000008  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1180  LuxR family transcriptional regulator  26.98 
 
 
267 aa  55.1  0.0000008  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_41810  putative transcriptional regulator  39.51 
 
 
901 aa  55.1  0.0000008  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01507  putative transcriptional regulator, LuxR family protein  45.45 
 
 
159 aa  55.1  0.0000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.993499  n/a   
 
 
-
 
NC_009656  PSPA7_3547  transcriptional regulator  36.26 
 
 
907 aa  54.3  0.000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  49.12 
 
 
209 aa  54.7  0.000001  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_008009  Acid345_0268  two component LuxR family transcriptional regulator  40.4 
 
 
217 aa  54.7  0.000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.289536  normal 
 
 
-
 
NC_014150  Bmur_1389  transcriptional regulator, LuxR family  41.67 
 
 
320 aa  54.3  0.000001  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_41800  putative transcriptional regulator  36.26 
 
 
907 aa  54.3  0.000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2318  LuxR family transcriptional regulator  46.55 
 
 
151 aa  54.3  0.000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5178  transcriptional regulator, LuxR family  35.71 
 
 
411 aa  54.7  0.000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3042  LuxR family transcriptional regulator  28.34 
 
 
257 aa  53.9  0.000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.494353  n/a   
 
 
-
 
NC_010086  Bmul_3186  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.9  0.000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.10411 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000002  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0203352 
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  40.58 
 
 
218 aa  53.5  0.000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_009050  Rsph17029_3769  regulatory protein, LuxR  28.34 
 
 
257 aa  53.9  0.000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.997171  normal 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  45.21 
 
 
214 aa  53.1  0.000003  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal 
 
 
-
 
NC_013721  HMPREF0424_0644  response regulator receiver domain protein  44.29 
 
 
261 aa  53.1  0.000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.520039 
 
 
-
 
NC_009620  Smed_4059  two component LuxR family transcriptional regulator  45.83 
 
 
212 aa  53.1  0.000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.111025  normal 
 
 
-
 
NC_007348  Reut_B3844  regulatory protein, LuxR  43.66 
 
 
944 aa  53.1  0.000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  45.21 
 
 
214 aa  53.1  0.000003  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0272  two component transcriptional regulator, LuxR family  39.44 
 
 
218 aa  53.1  0.000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.353555  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000003  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00509748 
 
 
-
 
NC_013889  TK90_1314  transcriptional regulator, LuxR family  43.55 
 
 
204 aa  53.1  0.000003  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.404844  normal 
 
 
-
 
NC_013165  Shel_17930  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  32.99 
 
 
258 aa  53.1  0.000003  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.265474  normal 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000003  Burkholderia cenocepacia HI2424  Bacteria  normal  hitchhiker  0.00685344 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  48.39 
 
 
214 aa  53.5  0.000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.0560765 
 
 
-
 
NC_007413  Ava_2254  LuxR family transcriptional regulator  31.54 
 
 
224 aa  52.8  0.000004  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.000000750634  normal 
 
 
-
 
NC_007973  Rmet_3576  two component LuxR family transcriptional regulator  46.48 
 
 
228 aa  52.8  0.000004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3836  two component LuxR family transcriptional regulator  42.86 
 
 
209 aa  52.8  0.000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000136397  normal  0.0231387 
 
 
-
 
NC_009665  Shew185_3713  two component LuxR family transcriptional regulator  42.86 
 
 
209 aa  52.8  0.000004  Shewanella baltica OS185  Bacteria  hitchhiker  0.000000000161759  n/a   
 
 
-
 
NC_008700  Sama_0646  response regulator receiver protein  41.54 
 
 
209 aa  52.8  0.000004  Shewanella amazonensis SB2B  Bacteria  normal  0.0492071  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  48.08 
 
 
208 aa  52.8  0.000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3654  two component transcriptional regulator, LuxR family  42.86 
 
 
209 aa  52.8  0.000004  Shewanella baltica OS223  Bacteria  unclonable  0.000000000464283  hitchhiker  0.00000781977 
 
 
-
 
NC_009052  Sbal_0792  two component LuxR family transcriptional regulator  42.86 
 
 
209 aa  52.8  0.000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.000000151034  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  48.21 
 
 
226 aa  52.4  0.000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_007509  Bcep18194_C7042  LuxR family transcriptional regulator  28.78 
 
 
237 aa  52.8  0.000005  Burkholderia sp. 383  Bacteria  normal  normal  0.395305 
 
 
-
 
NC_013093  Amir_2245  transcriptional regulator, LuxR family  43.1 
 
 
956 aa  52.8  0.000005  Actinosynnema mirum DSM 43827  Bacteria  unclonable  0.00000425814  n/a   
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  45.76 
 
 
222 aa  52.4  0.000006  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_008345  Sfri_0560  transcriptional regulator, LuxR family protein  41.79 
 
 
222 aa  52.4  0.000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2497  two component LuxR family transcriptional regulator  48.21 
 
 
229 aa  52.4  0.000006  Acidovorax citrulli AAC00-1  Bacteria  hitchhiker  0.000315398  normal  0.0281112 
 
 
-
 
NC_009831  Ssed_0929  two component LuxR family transcriptional regulator  44.07 
 
 
209 aa  52  0.000007  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000567962  normal 
 
 
-
 
NC_010498  EcSMS35_2093  DNA-binding transcriptional regulator CsgD  50 
 
 
190 aa  52  0.000007  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.661259 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  50.98 
 
 
213 aa  52  0.000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A3567  ATP-dependent transcription regulator LuxR  46.3 
 
 
251 aa  52  0.000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0657  two component LuxR family transcriptional regulator  44.07 
 
 
209 aa  52  0.000007  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000000493749  normal  0.229808 
 
 
-
 
NC_008322  Shewmr7_3365  two component LuxR family transcriptional regulator  44.07 
 
 
209 aa  52  0.000007  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000651556  normal  0.0242167 
 
 
-
 
NC_008577  Shewana3_0656  two component LuxR family transcriptional regulator  44.07 
 
 
209 aa  52  0.000007  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000830399  normal  0.140804 
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  43.94 
 
 
230 aa  52  0.000007  Sinorhizobium medicae WSM419  Bacteria  normal  decreased coverage  0.00554548 
 
 
-
 
CP001637  EcDH1_2605  transcriptional regulator, LuxR family  50 
 
 
216 aa  52  0.000008  Escherichia coli DH1  Bacteria  normal  0.196673  n/a   
 
 
-
 
NC_004347  SO_3982  DNA-binding nitrate/nitrite response regulator  44.07 
 
 
209 aa  52  0.000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011080  SNSL254_A1238  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  52  0.000008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.147361  normal 
 
 
-
 
NC_012892  B21_01044  hypothetical protein  50 
 
 
216 aa  51.6  0.000008  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1208  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  51.6  0.000008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.316434  normal  0.419874 
 
 
-
 
NC_010468  EcolC_2559  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  51.6  0.000008  Escherichia coli ATCC 8739  Bacteria  normal  0.980478  normal  0.382247 
 
 
-
 
NC_011149  SeAg_B2048  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  51.6  0.000008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0804096  n/a   
 
 
-
 
NC_009800  EcHS_A1158  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  51.6  0.000008  Escherichia coli HS  Bacteria  normal  0.354651  n/a   
 
 
-
 
NC_011205  SeD_A2231  DNA-binding transcriptional regulator CsgD  50 
 
 
216 aa  51.6  0.000008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.750523  normal  0.99411 
 
 
-
 
NC_009438  Sputcn32_0683  two component LuxR family transcriptional regulator  44.07 
 
 
209 aa  51.6  0.000008  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000388278  n/a   
 
 
-
 
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