| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0228 |
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| Symbol | |
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| ID | 6114451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 279921 |
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| End bp | 280637 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641631709 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001758624 |
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| Protein GI | 170724598 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTAT CCCAAAAAGA GCTTTGTACT ATGATGGATC TGGTGAGTTT CACCTTACAG
CACAATACGA CTTTAGGCAG TCGTCAACTT CTGCTGGATA AGCTTATGGA GATGTTTCGA
GCTGATTATG GTGCCTCCTG TTGTTGGAAT CCAAATGAAA AGTATTATCA AGAAGGGGTA
TTTAGCAATA TGTCCTTGGA TAATATATCA AAGTATAATG ATTACTATCA GTTCCATGAC
CCTATTACCA ATAAGCTTAG GCAATTTAGA CGCGCGGTTG CAGTGAGTGA GGTTATTTCA
AGAGATCAGT TGATCCAAAC TGAATTTTAC AACGACTTTT TACAGCGCGA CGGGCTTAGT
TTTGGGGTCA ATTTGCATAT CTACTGTGGG CAAGAGCATG TTTTTGATGT TCGATTATGG
AGAAGTCAGC AGCAGGGAGA TTTTGATGTA AAGCACCTTA ATCAACTCGA TTTACTGTTA
CCTTATTTAC GGGCTATGGG TGAGAGAGAG CCATTGAAAG AGTCACTCAG TTTTAATCTT
TTTACCCAAA GAGAACTTGA AGTGATCAGC CAGATTAAGT CAGGGATGAA TGATAAAAAT
ATGGCCAGAA CAATGAATGT ATCGGTTACA ACGCTTCGAT CTCACATTCG CTCCATATAC
AAGAAAGCGG ACGTTCACAG TCGCACGGAA CTTATCTCTA AATTAGCTCC CAATTAG
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| Protein sequence | MYLSQKELCT MMDLVSFTLQ HNTTLGSRQL LLDKLMEMFR ADYGASCCWN PNEKYYQEGV
FSNMSLDNIS KYNDYYQFHD PITNKLRQFR RAVAVSEVIS RDQLIQTEFY NDFLQRDGLS
FGVNLHIYCG QEHVFDVRLW RSQQQGDFDV KHLNQLDLLL PYLRAMGERE PLKESLSFNL
FTQRELEVIS QIKSGMNDKN MARTMNVSVT TLRSHIRSIY KKADVHSRTE LISKLAPN
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