| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1879 |
|---|
| Symbol | |
|---|
| ID | 7173796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2310199 |
|---|
| End bp | 2312718 |
|---|
| Gene Length | 2520 bp |
|---|
| Protein Length | 839 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643540394 |
|---|
| Product | ATP-dependent transcriptional regulator, MalT-like, LuxR family |
|---|
| Protein accession | YP_002436290 |
|---|
| Protein GI | 218886969 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2909] ATP-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 90 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTC CACGCCGAAC CGATATTCCG TACTTTTCCC CTCGACTCAA GGCCAGGCTG
CACGAAGCCC TGAACATGCG CAGCGTGTTC ATCGAGGCCC CATCCGGATA CGGAAAGACC
ACCATCGCGC AGAACTATCT GCGCGAACGC CTGCCCGAAG GCGCGACCTG GGTTCGACAT
GTCTGCGTAG AGGAATCGCC GCAGGCCGCC TGGCGTCGCT TTTGCCAGAC CATGCAGAAG
GTCGATGCGC ACACCGGCAG GACCATGCAG TCCTATGGCC TGCCGGACGA GGACAGCGCC
GGGCATCTGG CCTCGCTGCT GCGCGAACTG CCCTGCTCCA CGCCCTTCTG GCTGGTGCTT
GACGATTTCC ACCACCTTGC CCCCCATGTG CCTGCCCCGA TCTGGAAGGC CTTTCTGGAA
CACGAAGCCG CGCAACTGCG GCTGATCGTC GTCACCCGGC CCGTTGCAAC ACGCATCCTG
CCCTATGAAA AGGCCGGCAT CCTGCGCCTG AACGCTGACG ACCTTCGCCT GACGGAGGCG
GAGTCCAGGG AATATGCGAC CAGGGCGGGC ATTGCGCTCA ACGAGGCGCA GGCGCAGGAA
CTGCACCGCC GCGCCGAAGG CTGGATCATC GCGGCAACAC TGTATTTGCG GCGCTGGAAC
GAACGGGGGG CGTTTGCCCC GGCCTCCACC CAGACCCATG ACTCCGGGGT GGACGGCCTG
CTGCGGGACG TGGTCTGGGA CAATCTGGAC GAGGCCGGGC AGGAGTGCCT GCTGCGGCTT
TCACCCTTTG ACGCCTTTTC CGCGGAACAG GCTGCGTTTC TGCTGGGCAA GGCGCGCCTT
ACCCAGAAAA CGTGGGCGGC TCTGCAACAC AACGCCATGC TCCGGCATGA CCCTGCCTCG
GGCTTGTACT ATCCGCACAG CACGCTGCTG GATTTCACGC GCAGGATATT TGCCGAACTG
CCGGAAGAAA CACGCCGCGA CGCGCTTCTT GCCGCTGGCG ACTGGTGCGC CAGGTCCGGC
GACCTGGAAA ACGCCTTCGT CTTCTATTAC CGGCTGCGGG ACTACGAGCG CATTCTGGCG
CTCGACCTTT CCGGAATGAA GGGCGAAGGC CTGCTGGACA TGCCTGGCGT CGCCTATGTT
CCCGCGATCA GGGACATCGC GGCCAACAGC ACGCGGGCCA TGAAGGCCAC GCATCCGCTT
TCCGCCATCG CGCTGGCCCT CGACCTGCTG TCCGCCAACT GCCACGAGGA ATTCGGAGCC
CTCTTCGCGG AGCTTGCCGA CATCGTTGAA ACGGAGCCTT TCGCGCCGCA CCAGCGGGAC
TACCTGCGCG GTGAACTGCG GCTGCTGGAG TCCTTCACCT GTTACAACGA CATCGCGGCC
ATGGGCGTGC GCATGCTGGA GGCGTTGCAA CTGGCGGGCA GGCAGACGGC CATGGTCCGG
CTGGACGATT CATGGACCTT CGGCAATGTG TCCGTGCTCT TCATGTTCCA CCGCGAGCCC
GGTCGGCTGG ACGGCGAACT GGCGGACATG CAGACGTACT GCCCTCACTA TCTTGCCCTG
TCCGGGGGGC ACGGGGCGGG CGGCCCGGAA CTCATGGAGG CGGAATGCCG GTTGCACCGG
GGCGATGCCG ACCCGGCGGA AATCTCCGGC TACAAGGCCC GGCACCAGGC CGCCCTGCGG
GAGCAGGCCA GCATCGTCAT CGGGGCGGAG TTTCTTCTGG GCAGGGTGGC CCTGCTGCGG
GGCAACGCCG CCGCCCTTGC CGACGCCATG GACAACCTGA CCGGCATCGC GGGGCAATTC
CCCCAGCGGG CCAACCGGAT GGCGGCGGAC ATGGCCCGTT CCTTCCTGAT GAGCCTGCTG
CACCAGCCGG ACGAGATGGC GCACTGGCTG CGCGAGGCCA CGCCGGGCTC GCTGGCCAGG
CGTTTCTTCG TCCAGGTGCT CCCCTTTGCC GAACTGTGCC GCGCCCGCTA TCTGCTGCTG
TCCGGCAAGC CGGAACTGCT GCTTGGCGAA AACGAAGCGG CCCTGGGCCT GGCTTCCGCC
CTCAACTATT CCCTGGCCCT GACCTACGGG CATCTGCACG GCGCCGCCGC CTGGTTCATG
CTGGGCAAAC GCGACGCCGC AGCGGATTCC CTGCGCGCCG CCCTTGCCCT GGCCGTGCCG
GACGGCCTGC TTTTGCCTTT TGCGGAATGT TGGCCGTGGA TCGGCCCCCT GCTGAAAAAA
ATGCACCCAG GCGTGTGCCC GGAAATGCCC CCGGCATTTG CTGCGGACGT GTTCTCGCTG
GCGGAGCGGC TGGAAGCCGG ACGGCGCGCC GTCGCGGACA CGCTGTACTC CGCCCGGGGC
CGTTTCGGGC TATCCCCGCG CGAAGACGAA GTGGCCCGCC TGATGGCGGA CGGCCTGTCC
TACGGGGAAA TCGCGCAGCA CCTGTGCATC AGCCTGAACA CGGTGAAAAC CCACCTCAAG
AACGCCTACC AGAAAGTCGG AACGTCCTCC CGGTCAGACA TGAAGCGCCT GCTGTCGTGA
|
|---|
| Protein sequence | MARPRRTDIP YFSPRLKARL HEALNMRSVF IEAPSGYGKT TIAQNYLRER LPEGATWVRH
VCVEESPQAA WRRFCQTMQK VDAHTGRTMQ SYGLPDEDSA GHLASLLREL PCSTPFWLVL
DDFHHLAPHV PAPIWKAFLE HEAAQLRLIV VTRPVATRIL PYEKAGILRL NADDLRLTEA
ESREYATRAG IALNEAQAQE LHRRAEGWII AATLYLRRWN ERGAFAPAST QTHDSGVDGL
LRDVVWDNLD EAGQECLLRL SPFDAFSAEQ AAFLLGKARL TQKTWAALQH NAMLRHDPAS
GLYYPHSTLL DFTRRIFAEL PEETRRDALL AAGDWCARSG DLENAFVFYY RLRDYERILA
LDLSGMKGEG LLDMPGVAYV PAIRDIAANS TRAMKATHPL SAIALALDLL SANCHEEFGA
LFAELADIVE TEPFAPHQRD YLRGELRLLE SFTCYNDIAA MGVRMLEALQ LAGRQTAMVR
LDDSWTFGNV SVLFMFHREP GRLDGELADM QTYCPHYLAL SGGHGAGGPE LMEAECRLHR
GDADPAEISG YKARHQAALR EQASIVIGAE FLLGRVALLR GNAAALADAM DNLTGIAGQF
PQRANRMAAD MARSFLMSLL HQPDEMAHWL REATPGSLAR RFFVQVLPFA ELCRARYLLL
SGKPELLLGE NEAALGLASA LNYSLALTYG HLHGAAAWFM LGKRDAAADS LRAALALAVP
DGLLLPFAEC WPWIGPLLKK MHPGVCPEMP PAFAADVFSL AERLEAGRRA VADTLYSARG
RFGLSPREDE VARLMADGLS YGEIAQHLCI SLNTVKTHLK NAYQKVGTSS RSDMKRLLS
|
|---|
| |