More than 300 homologs were found in PanDaTox collection
for query gene Mrub_0375 on replicon NC_013946
Organism: Meiothermus ruber DSM 1279



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013946  Mrub_0375  Crp/Fnr family transcriptional regulator  100 
 
 
196 aa  390  1e-108  Meiothermus ruber DSM 1279  Bacteria  normal  0.887845  normal 
 
 
-
 
NC_014212  Mesil_1482  transcriptional regulator, Crp/Fnr family  81.63 
 
 
196 aa  330  1e-89  Meiothermus silvanus DSM 9946  Bacteria  normal  0.053801  hitchhiker  0.0000318932 
 
 
-
 
NC_008025  Dgeo_1419  Crp/FNR family transcriptional regulator  42.39 
 
 
208 aa  138  4.999999999999999e-32  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.0779815 
 
 
-
 
NC_014212  Mesil_2484  transcriptional regulator, Crp/Fnr family  39.68 
 
 
202 aa  111  7.000000000000001e-24  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.235796 
 
 
-
 
NC_008025  Dgeo_1015  CRP/FNR family transcriptional regulator  38.38 
 
 
204 aa  111  8.000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  unclonable  0.00000000202163  unclonable  0.0000000139192 
 
 
-
 
NC_013946  Mrub_0426  Crp/Fnr family transcriptional regulator  37.02 
 
 
202 aa  108  4.0000000000000004e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86211 
 
 
-
 
NC_013739  Cwoe_5808  transcriptional regulator, Crp/Fnr family  32.28 
 
 
231 aa  80.9  0.00000000000001  Conexibacter woesei DSM 14684  Bacteria  normal  0.254135  normal  0.0101482 
 
 
-
 
NC_008699  Noca_1641  cyclic nucleotide-binding  28.65 
 
 
267 aa  76.3  0.0000000000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1987  regulatory subunit of cAMP-dependent protein kinases-like  31.18 
 
 
236 aa  74.3  0.0000000000009  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_0884  Crp/Fnr family transcriptional regulator  29.41 
 
 
214 aa  73.6  0.000000000002  Meiothermus ruber DSM 1279  Bacteria  normal  0.163926  normal 
 
 
-
 
NC_008148  Rxyl_0860  Crp/FNR family transcriptional regulator  30.57 
 
 
234 aa  72.8  0.000000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.693979  n/a   
 
 
-
 
NC_004311  BRA0262  Crp/FNR family transcriptional regulator  26.24 
 
 
231 aa  72.4  0.000000000004  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0238  Crp/FNR family transcriptional regulator  26.24 
 
 
231 aa  72.4  0.000000000004  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_0324  Crp/FNR family transcriptional regulator  29.95 
 
 
226 aa  72.4  0.000000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.105795  normal 
 
 
-
 
NC_007925  RPC_3945  Crp/FNR family transcriptional regulator  29.35 
 
 
240 aa  72  0.000000000005  Rhodopseudomonas palustris BisB18  Bacteria  decreased coverage  0.0000374248  normal 
 
 
-
 
NC_013132  Cpin_0678  transcriptional regulator, Crp/Fnr family  28.04 
 
 
236 aa  72  0.000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0236133  normal 
 
 
-
 
NC_013440  Hoch_2081  transcriptional regulator, Crp/Fnr family  30.26 
 
 
229 aa  71.2  0.000000000008  Haliangium ochraceum DSM 14365  Bacteria  normal  0.264181  normal 
 
 
-
 
NC_011894  Mnod_4596  transcriptional regulator, Crp/Fnr family  31.77 
 
 
230 aa  71.2  0.000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0698  CRP/FNR family transcriptional regulator  29.03 
 
 
227 aa  70.9  0.00000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3141  cyclic nucleotide-binding protein  29.44 
 
 
249 aa  70.9  0.00000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0400922  normal 
 
 
-
 
NC_008025  Dgeo_1275  Crp/FNR family transcriptional regulator  31.28 
 
 
230 aa  71.2  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.651323 
 
 
-
 
NC_011126  HY04AAS1_0644  transcriptional regulator, Crp/Fnr family  26.21 
 
 
243 aa  70.1  0.00000000002  Hydrogenobaculum sp. Y04AAS1  Bacteria  unclonable  0.0000000000000386152  n/a   
 
 
-
 
NC_014212  Mesil_2833  transcriptional regulator, Crp/Fnr family  32.09 
 
 
213 aa  70.1  0.00000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0320601  normal  0.661336 
 
 
-
 
NC_009485  BBta_6822  Crp/FNR family transcriptional regulator  29 
 
 
239 aa  70.1  0.00000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1523  transcriptional regulator, Crp/Fnr family  28.06 
 
 
231 aa  69.3  0.00000000003  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009720  Xaut_1746  CRP/FNR family transcriptional regulator  33.51 
 
 
236 aa  69.3  0.00000000004  Xanthobacter autotrophicus Py2  Bacteria  normal  0.753218  normal  0.546792 
 
 
-
 
NC_010718  Nther_2034  transcriptional regulator, Crp/Fnr family  29.55 
 
 
243 aa  68.9  0.00000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.663242  normal  0.0439569 
 
 
-
 
NC_014151  Cfla_0719  transcriptional regulator, Crp/Fnr family  29.95 
 
 
257 aa  68.9  0.00000000005  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000204419 
 
 
-
 
NC_007643  Rru_A1622  Crp/FNR family transcriptional regulator  29.17 
 
 
259 aa  68.6  0.00000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.366469  n/a   
 
 
-
 
NC_008228  Patl_3367  Crp/FNR family transcriptional regulator  25.38 
 
 
230 aa  68.6  0.00000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_24470  cAMP-binding protein  30.96 
 
 
261 aa  67.4  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0339  cyclic nucleotide-binding  29.69 
 
 
225 aa  67.4  0.0000000001  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0723  Crp/FNR family transcriptional regulator  32.22 
 
 
228 aa  67  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.362046  normal  0.190371 
 
 
-
 
NC_010505  Mrad2831_3277  Crp/FNR family transcriptional regulator  29.94 
 
 
226 aa  66.6  0.0000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1803  Crp/FNR family transcriptional regulator  29.69 
 
 
249 aa  66.6  0.0000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0808632  n/a   
 
 
-
 
NC_008578  Acel_1995  transcriptional regulator  31.35 
 
 
224 aa  66.6  0.0000000002  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_6276  CRP/FNR family transcriptional regulator  25.13 
 
 
231 aa  66.2  0.0000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.298402  normal  0.17195 
 
 
-
 
NC_007516  Syncc9605_0269  Crp/FNR family transcriptional regulator  30.57 
 
 
238 aa  66.2  0.0000000003  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0796  cyclic nucleotide-binding protein  28.48 
 
 
238 aa  66.2  0.0000000003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1482  CRP/FNR family transcriptional regulator  30.37 
 
 
235 aa  65.5  0.0000000004  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.000000238682  n/a   
 
 
-
 
NC_013216  Dtox_1633  transcriptional regulator, Crp/Fnr family  26.4 
 
 
226 aa  65.9  0.0000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.391452  normal  0.0281193 
 
 
-
 
NC_012850  Rleg_3413  transcriptional regulator, Crp/Fnr family  29.44 
 
 
249 aa  65.9  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_1234  Crp/FNR family transcriptional regulator  29.26 
 
 
232 aa  65.1  0.0000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_18160  putative transcriptional regulator, Crp/Fnr family  23.2 
 
 
219 aa  64.7  0.0000000008  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.000000607267  n/a   
 
 
-
 
NC_008025  Dgeo_0106  Crp/FNR family transcriptional regulator  33.71 
 
 
254 aa  64.7  0.0000000008  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_1955  transcriptional regulator, Crp/Fnr family  27.51 
 
 
229 aa  64.7  0.0000000008  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_2075  Crp/FNR family transcriptional regulator  30 
 
 
210 aa  64.3  0.000000001  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4621  transcriptional regulator, Crp/Fnr family  26.46 
 
 
236 aa  64.3  0.000000001  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_2039  CRP/FNR family transcriptional regulator  28.57 
 
 
242 aa  63.9  0.000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.191538  hitchhiker  0.00387918 
 
 
-
 
NC_011899  Hore_09760  putative transcriptional regulator, Crp/Fnr family  23.5 
 
 
226 aa  63.9  0.000000001  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2102  Crp/FNR family transcriptional regulator  24.62 
 
 
226 aa  63.5  0.000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000889631  n/a   
 
 
-
 
NC_007778  RPB_1465  Crp/FNR family transcriptional regulator  27.51 
 
 
236 aa  63.5  0.000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.342125  normal  0.439299 
 
 
-
 
NC_013132  Cpin_5556  transcriptional regulator, Crp/Fnr family  25.65 
 
 
352 aa  63.5  0.000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.487576  normal  0.0420739 
 
 
-
 
NC_008340  Mlg_0631  cyclic nucleotide-binding protein  26.09 
 
 
235 aa  63.5  0.000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.0164371 
 
 
-
 
NC_010424  Daud_2039  CRP/FNR family transcriptional regulator  27.27 
 
 
226 aa  62.8  0.000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1951  Crp/FNR family transcriptional regulator  28 
 
 
222 aa  62.8  0.000000003  Ruegeria sp. TM1040  Bacteria  normal  0.861655  normal  0.0267012 
 
 
-
 
NC_010505  Mrad2831_2581  Crp/FNR family transcriptional regulator  31.05 
 
 
222 aa  62.8  0.000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1592  transcriptional regulator, Crp/Fnr family  25.7 
 
 
228 aa  62.4  0.000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007958  RPD_3066  cyclic nucleotide-binding  26.11 
 
 
240 aa  62.4  0.000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0754  Crp/FNR family transcriptional regulator  24.74 
 
 
236 aa  62.4  0.000000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.0000212493  n/a   
 
 
-
 
NC_008699  Noca_1660  Crp/FNR family transcriptional regulator  30.05 
 
 
261 aa  62.4  0.000000004  Nocardioides sp. JS614  Bacteria  normal  0.74426  n/a   
 
 
-
 
NC_009668  Oant_3114  CRP/FNR family transcriptional regulator  26.11 
 
 
232 aa  62  0.000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1040  cyclic nucleotide-binding protein  23.81 
 
 
238 aa  62  0.000000005  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.464794 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  28.42 
 
 
252 aa  62  0.000000005  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_011830  Dhaf_1167  transcriptional regulator, Crp/Fnr family  23.83 
 
 
239 aa  62  0.000000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000625437  n/a   
 
 
-
 
NC_009253  Dred_1262  CRP/FNR family transcriptional regulator  28.57 
 
 
222 aa  62  0.000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  0.247212  n/a   
 
 
-
 
NC_007778  RPB_0893  Crp/FNR family transcriptional regulator  32.07 
 
 
226 aa  61.6  0.000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3150  Crp/FNR family transcriptional regulator  23.96 
 
 
252 aa  61.6  0.000000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013171  Apre_1580  transcriptional regulator, Crp/Fnr family  25.14 
 
 
215 aa  61.6  0.000000007  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0824  Crp/FNR family transcriptional regulator  25.39 
 
 
225 aa  61.6  0.000000007  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0928817  normal  0.0486748 
 
 
-
 
NC_013061  Phep_2492  response regulator receiver  26.02 
 
 
352 aa  61.6  0.000000007  Pedobacter heparinus DSM 2366  Bacteria  normal  0.570528  normal  0.0101485 
 
 
-
 
NC_014212  Mesil_2074  transcriptional regulator, Crp/Fnr family  28.72 
 
 
225 aa  61.2  0.000000008  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.971908 
 
 
-
 
NC_010320  Teth514_2386  CRP/FNR family transcriptional regulator  25.52 
 
 
225 aa  61.2  0.000000008  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2928  transcriptional regulator, Crp/Fnr family  27.23 
 
 
232 aa  61.2  0.000000008  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.39759 
 
 
-
 
NC_007348  Reut_B4212  cyclic nucleotide-binding: regulatory protein, Crp  28.87 
 
 
303 aa  61.2  0.000000009  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_2634  CRP/FNR family transcriptional regulator  26.8 
 
 
249 aa  61.2  0.000000009  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_2246  Crp/FNR family transcriptional regulator  27.14 
 
 
233 aa  61.2  0.000000009  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_3032  Crp family transcriptional regulator  33.33 
 
 
224 aa  60.5  0.00000001  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0461942  normal 
 
 
-
 
NC_010524  Lcho_0755  Crp/FNR family transcriptional regulator  29.65 
 
 
222 aa  60.8  0.00000001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.2571 
 
 
-
 
NC_008242  Meso_4277  Crp/FNR family transcriptional regulator  23.76 
 
 
234 aa  60.8  0.00000001  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0778  Crp/FNR family transcriptional regulator  24.74 
 
 
236 aa  60.5  0.00000001  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000312841  n/a   
 
 
-
 
NC_009668  Oant_4381  CRP/FNR family transcriptional regulator  25.52 
 
 
231 aa  61.2  0.00000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0257  transcriptional regulator NnrR  23.37 
 
 
232 aa  60.1  0.00000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2058  transcriptional regulator, Crp/Fnr family  29.28 
 
 
225 aa  60.1  0.00000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_05940  putative transcriptional regulator, Crp/Fnr family  27.89 
 
 
231 aa  60.5  0.00000002  Halothermothrix orenii H 168  Bacteria  normal  0.558941  n/a   
 
 
-
 
NC_013161  Cyan8802_2082  transcriptional regulator, Crp/Fnr family  29.28 
 
 
225 aa  60.1  0.00000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5184  transcriptional regulator FixK  27.62 
 
 
211 aa  60.1  0.00000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.639909 
 
 
-
 
NC_007958  RPD_1444  Crp/Fnr family transcriptional regulator  25.93 
 
 
236 aa  60.1  0.00000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.920255  normal 
 
 
-
 
NC_013174  Jden_0435  transcriptional regulator, Crp/Fnr family  27.55 
 
 
226 aa  60.1  0.00000002  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.376669 
 
 
-
 
NC_008820  P9303_24561  CRP family global nitrogen regulatory protein  28.72 
 
 
222 aa  60.5  0.00000002  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_013730  Slin_3553  transcriptional regulator, Crp/Fnr family  26.86 
 
 
348 aa  60.1  0.00000002  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.528491 
 
 
-
 
NC_011729  PCC7424_0372  transcriptional regulator, Crp/Fnr family  29.28 
 
 
225 aa  60.1  0.00000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009049  Rsph17029_1972  CRP/FNR family transcriptional regulator  26.37 
 
 
233 aa  59.3  0.00000003  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_2762  transcriptional regulator, Crp/Fnr family  26.34 
 
 
234 aa  59.7  0.00000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_0327  Crp/FNR family transcriptional regulator  26.37 
 
 
233 aa  59.3  0.00000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.539351  n/a   
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  28.04 
 
 
254 aa  58.9  0.00000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1010  CRP/FNR family transcriptional regulator  28.72 
 
 
257 aa  59.3  0.00000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010730  SYO3AOP1_0394  transcriptional regulator, Crp/Fnr family  26.63 
 
 
237 aa  58.9  0.00000004  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2129  Crp/Fnr family transcriptional regulator  26.49 
 
 
225 aa  58.9  0.00000005  Meiothermus ruber DSM 1279  Bacteria  normal  0.185639  normal  0.344505 
 
 
-
 
NC_013530  Xcel_3038  transcriptional regulator, Crp/Fnr family  26.46 
 
 
225 aa  58.5  0.00000006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
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