More than 300 homologs were found in PanDaTox collection
for query gene Dfer_1662 on replicon NC_013037
Organism: Dyadobacter fermentans DSM 18053



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013037  Dfer_1662  two component transcriptional regulator, LuxR family  100 
 
 		 199 aa  409  1e-113  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.214082  normal  0.496902 
 
 
-
 
NC_013037  Dfer_1286  two component transcriptional regulator, LuxR family  35.53 
 
 		 215 aa  143  1e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.13459  normal  0.233078 
 
 
-
 
NC_013132  Cpin_4114  two component transcriptional regulator, LuxR family  36.84 
 
 		 208 aa  139  1.9999999999999998e-32  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0576718  normal  0.109105 
 
 
-
 
NC_013037  Dfer_2086  two component transcriptional regulator, LuxR family  36.04 
 
 		 220 aa  136  2e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.963114 
 
 
-
 
NC_013037  Dfer_2335  two component transcriptional regulator, LuxR family  37.95 
 
 		 209 aa  135  5e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.938318  normal  1 
 
 
-
 
NC_013037  Dfer_4796  two component transcriptional regulator, LuxR family  35.75 
 
 		 206 aa  131  6e-30  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00878953 
 
 
-
 
NC_013037  Dfer_5301  two component transcriptional regulator, LuxR family  33.67 
 
 		 212 aa  130  1.0000000000000001e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0298564 
 
 
-
 
NC_013037  Dfer_1284  two component transcriptional regulator, LuxR family  33.51 
 
 		 209 aa  125  4.0000000000000003e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.108206  normal  0.346883 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  36.46 
 
 		 216 aa  109  2.0000000000000002e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  36.2 
 
 		 215 aa  109  3e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  36.81 
 
 		 215 aa  109  3e-23  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  36.2 
 
 		 215 aa  109  3e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  36.2 
 
 		 215 aa  109  3e-23  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  35.88 
 
 		 215 aa  107  1e-22  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  33.68 
 
 		 235 aa  107  1e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  35.88 
 
 		 215 aa  106  2e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  37.06 
 
 		 216 aa  105  4e-22  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  36 
 
 		 215 aa  105  5e-22  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  35.88 
 
 		 215 aa  104  7e-22  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  103  1e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  33.95 
 
 		 223 aa  104  1e-21  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  103  1e-21  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  34.09 
 
 		 210 aa  103  1e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  33.53 
 
 		 210 aa  103  1e-21  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  34.38 
 
 		 212 aa  103  2e-21  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  103  2e-21  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  28.98 
 
 		 211 aa  103  2e-21  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  103  2e-21  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  103  2e-21  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  103  2e-21  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  35.29 
 
 		 215 aa  103  2e-21  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  102  3e-21  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  35.29 
 
 		 282 aa  102  4e-21  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  102  4e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  102  4e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  36.25 
 
 		 215 aa  101  6e-21  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  34.71 
 
 		 215 aa  101  6e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  31.02 
 
 		 217 aa  101  8e-21  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  37.74 
 
 		 214 aa  101  8e-21  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  33.93 
 
 		 210 aa  100  1e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  33.53 
 
 		 213 aa  100  1e-20  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  33.93 
 
 		 210 aa  100  1e-20  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  32.77 
 
 		 210 aa  100  2e-20  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  31.61 
 
 		 210 aa  100  2e-20  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_008789  Hhal_0023  two component LuxR family transcriptional regulator  30.23 
 
 		 216 aa  99.4  3e-20  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  33.93 
 
 		 210 aa  99.4  3e-20  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008781  Pnap_0922  two component LuxR family transcriptional regulator  31.07 
 
 		 210 aa  99.4  3e-20  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.114328  normal  1 
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  33.53 
 
 		 214 aa  99.4  4e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  32.34 
 
 		 210 aa  99  4e-20  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  30.22 
 
 		 210 aa  98.6  5e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  34.59 
 
 		 210 aa  98.6  5e-20  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  32.76 
 
 		 210 aa  98.2  6e-20  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_013037  Dfer_1285  two component transcriptional regulator, LuxR family  28.8 
 
 		 209 aa  98.2  6e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0996283  normal  0.344284 
 
 
-
 
NC_010552  BamMC406_3499  two component LuxR family transcriptional regulator  32.94 
 
 		 203 aa  98.2  6e-20  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00551314 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  32.74 
 
 		 210 aa  98.6  6e-20  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  32.94 
 
 		 215 aa  98.2  6e-20  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  34.73 
 
 		 210 aa  98.2  6e-20  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  34.73 
 
 		 239 aa  98.6  6e-20  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  31.95 
 
 		 210 aa  98.2  7e-20  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  33.33 
 
 		 210 aa  98.2  7e-20  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  33.75 
 
 		 211 aa  98.2  7e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  33.33 
 
 		 210 aa  98.2  7e-20  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  33.33 
 
 		 210 aa  98.2  7e-20  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_1943  two component LuxR family transcriptional regulator  31.52 
 
 		 214 aa  97.8  9e-20  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_2246  two component LuxR family transcriptional regulator  31.18 
 
 		 214 aa  97.8  9e-20  Shewanella baltica OS195  Bacteria  normal  0.0703025  hitchhiker  0.00413313 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  30.46 
 
 		 210 aa  96.7  2e-19  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_010625  Bphy_5813  two component LuxR family transcriptional regulator  33.53 
 
 		 215 aa  97.1  2e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.118405 
 
 
-
 
NC_013037  Dfer_1276  two component transcriptional regulator, LuxR family  29.69 
 
 		 209 aa  97.1  2e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.161375  normal  0.335829 
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  31.65 
 
 		 236 aa  96.3  2e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  29.78 
 
 		 224 aa  97.1  2e-19  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_010623  Bphy_4335  two component LuxR family transcriptional regulator  37.25 
 
 		 194 aa  97.1  2e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  29.48 
 
 		 229 aa  95.9  3e-19  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  29.67 
 
 		 210 aa  96.3  3e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0945  two component LuxR family transcriptional regulator  37.42 
 
 		 210 aa  96.3  3e-19  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1089  two component LuxR family transcriptional regulator  37.42 
 
 		 210 aa  96.3  3e-19  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_7047  two component LuxR family transcriptional regulator  31.87 
 
 		 215 aa  95.9  3e-19  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.976007 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  33.96 
 
 		 210 aa  96.3  3e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  31.14 
 
 		 214 aa  95.5  4e-19  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_014230  CA2559_06590  DNA-binding response regulator, LuxR family protein  33.76 
 
 		 210 aa  95.5  4e-19  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B1780  EsrB  35.06 
 
 		 212 aa  95.1  6e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.111024  n/a   
 
 
-
 
NC_011083  SeHA_C1526  two-component response regulator EsrB  35.06 
 
 		 212 aa  94.7  7e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.577557  hitchhiker  0.00169027 
 
 
-
 
NC_011094  SeSA_A1489  EsrB  35.06 
 
 		 212 aa  94.7  7e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.121116  normal  0.320198 
 
 
-
 
NC_011205  SeD_A1950  hypothetical protein  35.06 
 
 		 212 aa  94.7  7e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.0094858 
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  31.68 
 
 		 220 aa  94.7  8e-19  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  28.72 
 
 		 219 aa  94.4  9e-19  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_011901  Tgr7_1909  response regulator receiver protein  33.33 
 
 		 220 aa  94.4  1e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.631594  n/a   
 
 
-
 
NC_010524  Lcho_1400  two component LuxR family transcriptional regulator  31.74 
 
 		 205 aa  93.2  2e-18  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  28.57 
 
 		 210 aa  93.2  2e-18  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  30.11 
 
 		 214 aa  93.2  2e-18  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  28.72 
 
 		 220 aa  92.8  3e-18  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  34.38 
 
 		 215 aa  92.4  4e-18  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  32.73 
 
 		 214 aa  92  5e-18  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007908  Rfer_0563  two component LuxR family transcriptional regulator  29.51 
 
 		 209 aa  92  5e-18  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_1547  response regulator  29.17 
 
 		 214 aa  92  5e-18  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000288339  normal  1 
 
 
-
 
NC_008577  Shewana3_1608  response regulator  29.17 
 
 		 214 aa  92  5e-18  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000660452  normal  0.150334 
 
 
-
 
NC_003910  CPS_3271  response regulator  28.75 
 
 		 214 aa  91.7  6e-18  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_011663  Sbal223_1782  response regulator  29.17 
 
 		 214 aa  91.7  6e-18  Shewanella baltica OS223  Bacteria  normal  0.0381154  hitchhiker  0.0000000750596 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  31.76 
 
 		 215 aa  92  6e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_2562  response regulator  29.17 
 
 		 214 aa  91.7  6e-18  Shewanella baltica OS155  Bacteria  normal  0.0171044  n/a   
 
 
-
 
NC_009665  Shew185_2600  response regulator  29.17 
 
 		 214 aa  91.7  6e-18  Shewanella baltica OS185  Bacteria  hitchhiker  0.000388579  n/a   
 
 
-
 
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