| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4114 |
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| Symbol | |
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| ID | 8360287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5129099 |
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| End bp | 5129725 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644966286 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003123775 |
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| Protein GI | 256423122 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0576718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.109105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAATA TACTTGTTGT AGATGATCAG GAGGTAGTTC GTTACGGTAC TACACTCATC
CTGCAGAAGT CAATCGACGA CGCGCAGGTC AGTGAAGCGG GCAGTTTTGA AGACACCCTG
AAGATATTAT CTACCAAAAA ATTTGATCTT GTCATCCTGG ATATCGATAT GCCGGGGGGA
AATAATCACC AGATGCTGGA TGTGATTCGT TTACGCCATC CAGATATCAG GATCCTTATT
TTCTCCAGCT ACGATGAACA GATCTTTGGA TGGAGATATC TGGAGGCAGG CGCCGATGGC
TTCCTGTCTA AAAAAACGGG TATAGAAGAA ATTAAAAATG CAGCTAAAAC GCTGCTGAGG
GATGAAAAAT ACCTCAGTCC TACCCTGAAA CAGACATTAT TAAATAACTT CACTAATAAG
AAAAGCGCTA CAAATCCTAT TCAACGTTTA TCCAGCCGTG AAAATAATAT CATGCAGTTG
TTGATTAAAG GTTCCAGTGT GGCCGAAATC GCAGATAAAC TCAGTTTACA GATATCTACC
GTCAGCACCT ATAAGAAAAG GATTTTCGAA AAACTGCAGG TCTCCAATGT CATAGAAATG
ATAGAGAAAG TACAGCTCTA CTCATAA
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| Protein sequence | MPNILVVDDQ EVVRYGTTLI LQKSIDDAQV SEAGSFEDTL KILSTKKFDL VILDIDMPGG
NNHQMLDVIR LRHPDIRILI FSSYDEQIFG WRYLEAGADG FLSKKTGIEE IKNAAKTLLR
DEKYLSPTLK QTLLNNFTNK KSATNPIQRL SSRENNIMQL LIKGSSVAEI ADKLSLQIST
VSTYKKRIFE KLQVSNVIEM IEKVQLYS
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