More than 300 homologs were found in PanDaTox collection
for query gene Cpin_4114 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_4114  two component transcriptional regulator, LuxR family  100 
 
 		 208 aa  421  1e-117  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0576718  normal  0.109105 
 
 
-
 
NC_013037  Dfer_4796  two component transcriptional regulator, LuxR family  49.03 
 
 		 206 aa  201  6e-51  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00878953 
 
 
-
 
NC_013037  Dfer_1286  two component transcriptional regulator, LuxR family  46.15 
 
 		 215 aa  177  1e-43  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.13459  normal  0.233078 
 
 
-
 
NC_013037  Dfer_5301  two component transcriptional regulator, LuxR family  42.79 
 
 		 212 aa  171  5e-42  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.0298564 
 
 
-
 
NC_013037  Dfer_1284  two component transcriptional regulator, LuxR family  37.86 
 
 		 209 aa  167  1e-40  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.108206  normal  0.346883 
 
 
-
 
NC_013037  Dfer_2086  two component transcriptional regulator, LuxR family  41.35 
 
 		 220 aa  166  2e-40  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  normal  0.963114 
 
 
-
 
NC_013037  Dfer_2335  two component transcriptional regulator, LuxR family  42.65 
 
 		 209 aa  151  5.9999999999999996e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.938318  normal  1 
 
 
-
 
NC_013037  Dfer_1662  two component transcriptional regulator, LuxR family  36.84 
 
 		 199 aa  139  1.9999999999999998e-32  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.214082  normal  0.496902 
 
 
-
 
NC_013037  Dfer_1276  two component transcriptional regulator, LuxR family  34.62 
 
 		 209 aa  138  4.999999999999999e-32  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.161375  normal  0.335829 
 
 
-
 
NC_003295  RSc0292  response regulator transcription regulator protein  38.34 
 
 		 210 aa  136  2e-31  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_0153  two component transcriptional regulator, LuxR family  38.34 
 
 		 210 aa  135  4e-31  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_0145  two component transcriptional regulator, LuxR family  38.34 
 
 		 210 aa  135  5e-31  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013037  Dfer_0608  two component transcriptional regulator, LuxR family  33.82 
 
 		 209 aa  134  8e-31  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.631365  normal  1 
 
 
-
 
NC_007973  Rmet_0090  two component LuxR family transcriptional regulator  36.79 
 
 		 210 aa  129  5.0000000000000004e-29  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A2902  two component LuxR family transcriptional regulator  33.16 
 
 		 212 aa  128  6e-29  Methylibium petroleiphilum PM1  Bacteria  normal  0.255362  normal  1 
 
 
-
 
NC_011312  VSAL_I2141  response regulator  34.83 
 
 		 214 aa  128  6e-29  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_010814  Glov_1565  two component transcriptional regulator, LuxR family  38.05 
 
 		 214 aa  128  7.000000000000001e-29  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_013037  Dfer_1285  two component transcriptional regulator, LuxR family  33.65 
 
 		 209 aa  126  2.0000000000000002e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0996283  normal  0.344284 
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  35.71 
 
 		 210 aa  125  3e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  34.85 
 
 		 214 aa  125  3e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_007347  Reut_A0121  two component LuxR family transcriptional regulator  36.79 
 
 		 210 aa  125  4.0000000000000003e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.830531  n/a   
 
 
-
 
NC_012791  Vapar_4108  two component transcriptional regulator, LuxR family  33.67 
 
 		 210 aa  125  4.0000000000000003e-28  Variovorax paradoxus S110  Bacteria  normal  0.755468  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  35.2 
 
 		 210 aa  124  7e-28  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_010501  PputW619_3375  two component LuxR family transcriptional regulator  37.13 
 
 		 212 aa  124  7e-28  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002947  PP_4099  DNA-binding response regulator GacA  37.62 
 
 		 212 aa  124  1e-27  Pseudomonas putida KT2440  Bacteria  normal  0.427607  normal  0.0594882 
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  33.84 
 
 		 215 aa  123  1e-27  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_009512  Pput_1765  two component LuxR family transcriptional regulator  37.62 
 
 		 212 aa  124  1e-27  Pseudomonas putida F1  Bacteria  normal  0.456405  hitchhiker  0.00257365 
 
 
-
 
NC_004578  PSPTO_3024  DNA-binding response regulator GacA  35.32 
 
 		 214 aa  123  2e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.26082  n/a   
 
 
-
 
NC_007005  Psyr_2897  LuxR response regulator receiver  35.68 
 
 		 222 aa  123  2e-27  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.017691  normal  0.317002 
 
 
-
 
NC_009656  PSPA7_2613  response regulator GacA  34.33 
 
 		 214 aa  123  2e-27  Pseudomonas aeruginosa PA7  Bacteria  normal  0.466832  n/a   
 
 
-
 
NC_010622  Bphy_1508  two component LuxR family transcriptional regulator  34.5 
 
 		 236 aa  123  2e-27  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_1762  two component LuxR family transcriptional regulator  33.17 
 
 		 210 aa  123  2e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_02748  response regulator  32.34 
 
 		 214 aa  123  2e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_30650  response regulator GacA  34.33 
 
 		 214 aa  123  2e-27  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  hitchhiker  0.00700013 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  33.67 
 
 		 210 aa  122  3e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  33.67 
 
 		 239 aa  122  3e-27  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_011992  Dtpsy_3068  two component transcriptional regulator, LuxR family  32 
 
 		 209 aa  121  6e-27  Acidovorax ebreus TPSY  Bacteria  normal  0.44153  n/a   
 
 
-
 
NC_008782  Ajs_3794  two component LuxR family transcriptional regulator  32 
 
 		 209 aa  121  6e-27  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008752  Aave_3862  two component LuxR family transcriptional regulator  33.67 
 
 		 210 aa  121  7e-27  Acidovorax citrulli AAC00-1  Bacteria  normal  0.734244  normal  1 
 
 
-
 
NC_010551  BamMC406_2966  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  121  8e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  0.288922 
 
 
-
 
NC_003910  CPS_3271  response regulator  33.33 
 
 		 214 aa  121  9e-27  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_009439  Pmen_2375  two component LuxR family transcriptional regulator  35.32 
 
 		 214 aa  120  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.405291  normal  0.0506876 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  32.16 
 
 		 235 aa  120  1.9999999999999998e-26  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011891  A2cp1_2172  two component transcriptional regulator, LuxR family  32.67 
 
 		 210 aa  120  1.9999999999999998e-26  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  32 
 
 		 220 aa  120  1.9999999999999998e-26  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_010084  Bmul_3052  two component LuxR family transcriptional regulator  33.33 
 
 		 218 aa  120  1.9999999999999998e-26  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317078  normal  1 
 
 
-
 
NC_008390  Bamb_3100  two component LuxR family transcriptional regulator  32.83 
 
 		 218 aa  119  3e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.650822  n/a   
 
 
-
 
NC_011145  AnaeK_2078  two component transcriptional regulator, LuxR family  32.18 
 
 		 210 aa  119  3.9999999999999996e-26  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  32.65 
 
 		 210 aa  118  4.9999999999999996e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0833  response regulator  32.5 
 
 		 227 aa  119  4.9999999999999996e-26  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  32.18 
 
 		 217 aa  118  6e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_008609  Ppro_3481  two component LuxR family transcriptional regulator  30.2 
 
 		 212 aa  118  6e-26  Pelobacter propionicus DSM 2379  Bacteria  normal  0.016753  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  32.18 
 
 		 213 aa  118  7.999999999999999e-26  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  35 
 
 		 214 aa  118  7.999999999999999e-26  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008836  BMA10229_A2133  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_3391  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009076  BURPS1106A_0243  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_0425  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0536791  n/a   
 
 
-
 
NC_009074  BURPS668_0231  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.214964  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2955  LuxR family DNA-binding response regulator  34.01 
 
 		 218 aa  117  9e-26  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_006348  BMA3290  LuxR family DNA-binding response regulator  33.84 
 
 		 455 aa  117  9.999999999999999e-26  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_007651  BTH_I0209  LuxR family DNA-binding response regulator  34.34 
 
 		 218 aa  117  9.999999999999999e-26  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  31.82 
 
 		 215 aa  117  9.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  34.29 
 
 		 210 aa  116  1.9999999999999998e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_007510  Bcep18194_A6403  two component LuxR family transcriptional regulator  32.83 
 
 		 271 aa  117  1.9999999999999998e-25  Burkholderia sp. 383  Bacteria  normal  1  normal  0.285313 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  32.65 
 
 		 216 aa  116  1.9999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  33.5 
 
 		 211 aa  116  1.9999999999999998e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  34.29 
 
 		 210 aa  116  1.9999999999999998e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010622  Bphy_1137  two component LuxR family transcriptional regulator  32.14 
 
 		 214 aa  115  3e-25  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  29.29 
 
 		 220 aa  116  3e-25  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_006369  lpl2571  transmission activator LetA  33 
 
 		 219 aa  115  3.9999999999999997e-25  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_1909  response regulator receiver protein  34.8 
 
 		 220 aa  115  5e-25  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.631594  n/a   
 
 
-
 
NC_007908  Rfer_1873  two component LuxR family transcriptional regulator  33.85 
 
 		 219 aa  115  5e-25  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007492  Pfl01_3067  two component LuxR family transcriptional regulator  35.53 
 
 		 208 aa  115  6e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.598248 
 
 
-
 
NC_007948  Bpro_0881  two component LuxR family transcriptional regulator  31.63 
 
 		 210 aa  115  6e-25  Polaromonas sp. JS666  Bacteria  normal  0.464883  normal  0.594453 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  33.17 
 
 		 211 aa  115  6e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  29.52 
 
 		 215 aa  115  6.9999999999999995e-25  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  30.61 
 
 		 214 aa  114  6.9999999999999995e-25  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007951  Bxe_A4347  two component LuxR family transcriptional regulator  33.17 
 
 		 218 aa  115  6.9999999999999995e-25  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.705126 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  33.33 
 
 		 215 aa  114  8.999999999999998e-25  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  32.14 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  31.12 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  32.34 
 
 		 210 aa  114  8.999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  29.85 
 
 		 215 aa  114  8.999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
CP001637  EcDH1_1732  two component transcriptional regulator, LuxR family  31 
 
 		 218 aa  114  1.0000000000000001e-24  Escherichia coli DH1  Bacteria  hitchhiker  0.00000000000321601  n/a   
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  33.81 
 
 		 210 aa  114  1.0000000000000001e-24  Yersinia pestis Angola  Bacteria  normal  1  normal  0.616678 
 
 
-
 
NC_011149  SeAg_B1173  response regulator  32.34 
 
 		 218 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000706228  n/a   
 
 
-
 
NC_006368  lpp2699  transmission activator LetA  32.5 
 
 		 219 aa  114  1.0000000000000001e-24  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010498  EcSMS35_1269  response regulator  31 
 
 		 218 aa  114  1.0000000000000001e-24  Escherichia coli SMS-3-5  Bacteria  hitchhiker  0.0000584326  hitchhiker  0.00198125 
 
 
-
 
NC_010658  SbBS512_E1041  response regulator  31 
 
 		 218 aa  114  1.0000000000000001e-24  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000000644757  n/a   
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  32.02 
 
 		 211 aa  114  1.0000000000000001e-24  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009801  EcE24377A_2147  response regulator  31 
 
 		 218 aa  114  1.0000000000000001e-24  Escherichia coli E24377A  Bacteria  hitchhiker  0.0000040455  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  29.56 
 
 		 224 aa  114  1.0000000000000001e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  34.34 
 
 		 213 aa  114  1.0000000000000001e-24  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_011094  SeSA_A2103  response regulator  32.34 
 
 		 218 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0532421  hitchhiker  0.00988724 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  31.63 
 
 		 216 aa  114  1.0000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A1296  response regulator  32.34 
 
 		 218 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0547167  hitchhiker  0.00000564902 
 
 
-
 
NC_010571  Oter_1551  two component LuxR family transcriptional regulator  30.85 
 
 		 229 aa  114  1.0000000000000001e-24  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.460798 
 
 
-
 
NC_011662  Tmz1t_0180  two component transcriptional regulator, LuxR family  29.29 
 
 		 213 aa  114  1.0000000000000001e-24  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C2162  response regulator  32.34 
 
 		 218 aa  114  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.284818  hitchhiker  0.000000016111 
 
 
-
 
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