| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_4796 |
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| Symbol | |
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| ID | 8228402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 5800289 |
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| End bp | 5800909 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644932645 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003089162 |
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| Protein GI | 255038541 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00878953 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACACA TACTGATCGC CGAAGACCAC GCAGTGGTAA GAATCGGTAC CAAACACCTC
CTCAAATCAC TAATTCCGGA TTCAACTATT TCGGACGTTG ACGATTTTGA CAAAATTCTT
CAGGAACTGG AAACAAAGGC CTATGACCTC CTGATCCTGG ATATCAATAT CCCGGGCGGC
AATACCACCA AAATGGTCGA AACGATCCGG ACCAAATCGC CCGGTATCCG AATCCTGATG
TTTTCGAGCT ATGACGAACA GCTGTACGGC CTGATGTACC TCCAAGCAGG TGCCGACGGA
TACCTTTCGA AAGATGCGCC CGAAGAAGAG TTCAAAACCG CCGTTATGAG CGTTTTGAAC
AATAAAAAAT ACATGAGCGA AGATATGCAG CAAATGAATA TCAATCGCCT CATCAATCCG
AAGGAATACA TGCCGGACCC GATCGTGAGC CTCTCGCCAC GCGAAACCGA CGTGATGAAC
CTTTTGAAGG AGGGACTAGG TACCGCCAAA ATCGCAGAAA AACTGAATTT GCAGCTTTCT
ACCGTGAGTA CCTACAAAGC CCGGATTTTT GAAAAACTGG GTGTGAAAAA CATCGTAGAA
TTGATTACAA AGATCAAGTA A
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| Protein sequence | MKHILIAEDH AVVRIGTKHL LKSLIPDSTI SDVDDFDKIL QELETKAYDL LILDINIPGG
NTTKMVETIR TKSPGIRILM FSSYDEQLYG LMYLQAGADG YLSKDAPEEE FKTAVMSVLN
NKKYMSEDMQ QMNINRLINP KEYMPDPIVS LSPRETDVMN LLKEGLGTAK IAEKLNLQLS
TVSTYKARIF EKLGVKNIVE LITKIK
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