Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_2897 |
Symbol | |
ID | 3368417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 3476311 |
End bp | 3476979 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637653243 |
Product | LuxR response regulator receiver |
Protein accession | YP_235969 |
Protein GI | 66046128 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.017691 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.317002 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTG CGCGAGGTGT CTGCTTGATT AAGGTGCTAG TTGTCGATGA CCATGATCTT GTCCGGACAG GCATCACACG CATGCTGGCC GACATTGATG GTCTGCAGGT TGTCGGACAG GCCGATTCCG GCGAGGAATC CCTGAAAAAA GCGCGCGAGC TCAAGCCCGA CGTCGTGCTG ATGGACGTCA AGATGCCGGG TATCGGAGGT CTGGAAGCGA CGCGCAAGAT GCTGCGCAGC CACCCGGATA TCAAGGTCGT CGCTGTCACC GTCTGTGAAG AAGATCCTTT CCCGACCCGT TTGCTGCAGG CCGGCGCTGC CGGTTACATG ACCAAGGGCG CCGGGCTCGC TGAAATGGTC CAGGCCATTC GCCTGGTGTT TGCCGGTCAG CGTTACATCA GCCCGCAGAT TGCCCAGCAA CTGGCATTGA AGTCATTTCA GCCGCAGGTC AACAATTCGC CGTTCGATCT GCTGTCCGAG CGCGAGATCC AGATTGCCCT GATGATTGTT GGCTGTCAGA AAGTCCAGAC CATCTCGGAC AAGCTGTGCC TGTCACCGAA AACCGTTAAT ACCTACCGAT ACCGTATCTT TGAAAAGCTC TCGATCAGCA GTGATGTTGA ACTGGCTTTG CTCGCTGTAC GTCACGGCAT GGTTGATGCC AGCGCCTGA
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Protein sequence | MTVARGVCLI KVLVVDDHDL VRTGITRMLA DIDGLQVVGQ ADSGEESLKK ARELKPDVVL MDVKMPGIGG LEATRKMLRS HPDIKVVAVT VCEEDPFPTR LLQAGAAGYM TKGAGLAEMV QAIRLVFAGQ RYISPQIAQQ LALKSFQPQV NNSPFDLLSE REIQIALMIV GCQKVQTISD KLCLSPKTVN TYRYRIFEKL SISSDVELAL LAVRHGMVDA SA
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