| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_5301 |
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| Symbol | |
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| ID | 8228912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 6397943 |
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| End bp | 6398581 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644933146 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003089659 |
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| Protein GI | 255039038 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0298564 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA TTTTAATTGT CGAAGACTAT CAAATTATCA GATTAGCAAC AAAAATATTA
GTACAGGATT TATACAAGGA GGCTACAATT CACGAAGCCG GCACTTTTGG TGCGGCATTG
GCCGCGCTTA CCGCGCGTAT GCACGACCTC GTCATCCTGG ACATTCAAAT TCCTGAGGGA
CAAGGTTTTG AAATGATTGC AGCACTGCGG GCAGTTCAGA AGAACGTCCC GATCCTCATT
TTTTCGGCCA TCGAAGAGCG GATTTACGGC ATTCATTACC TGCGCTCGGG AGCCAATGGT
TTTATATCGA AAAGCGCTGA TACGGACGAA ATTCTGGCGG CGATCAGGTC GGTTTCGGAA
ACAGGCAGGT ATGTGAGCCC GCGGATCAAA GTGGAGTTAC TCAACCAGCT TGACAAACAT
AACTACCAGT CCGACAATCC GTTGCTGGAC CTATCGGCGC GTGAGATCAC CATTATGGAT
ATGCTGATTG AAGGCTTCTG GATCAAGGAA ATCGCATCGA AGCTGGATCT GACCGAGAGT
TCGGTGAGCA CTTACAAAGC ACGGCTTTTT GAAAAGTTGC AGGTGACAAC GCTCATCGAA
ATGTTCCAGA AAGTGAGGCA TTACAAAGAT ATGGATTAA
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| Protein sequence | MKNILIVEDY QIIRLATKIL VQDLYKEATI HEAGTFGAAL AALTARMHDL VILDIQIPEG
QGFEMIAALR AVQKNVPILI FSAIEERIYG IHYLRSGANG FISKSADTDE ILAAIRSVSE
TGRYVSPRIK VELLNQLDKH NYQSDNPLLD LSAREITIMD MLIEGFWIKE IASKLDLTES
SVSTYKARLF EKLQVTTLIE MFQKVRHYKD MD
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