| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1285 |
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| Symbol | |
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| ID | 8224856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1515644 |
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| End bp | 1516273 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644929146 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003085698 |
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| Protein GI | 255035077 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0996283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.344284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATAC TCATTATCGA GGACGAGCCG CTGACGGTGC TTGGGTTGAA ACAGAAAATC
AAAGAAATCA ATCCCGCCGC GATGGTGGAT AATGCCCCGT CCGTCGACAT GGCTTTTGAA
CTGACCGGAC AAAACACTTA CGAACTGATT ATCCTCGATA TCGACATTAA AGGCAAGGCA
GGCGCCGGAG TGGTGGAGCG CATGAAAACG CTTTATCCCG CCACCGCGAT TCTCGTGATC
ACGGATTTAG ATGAGCGCAT TTACGGACTG CCGTATATCA AGGCAGGTTC TGACGGATTT
TTATCCAAAC TGGCGCCATC CGCACAGTTC GACGAGGCAA TCCGGGGCAT GATGGTGATG
GGTAAATATG CCAGTACCGC TTTGCAGCAG CAGATTATCC AGGAAAACCA CGTCACGCGG
TCCGTGCGGC ATGCCAATCC GCTCAAAAGC ATTTCCGCCC GAGAGAAGCA GGTCATGAAC
CACCTGATCG CCGGAAAGTC CACCGCCGAA ATCGCCGCAA TTCTGAACAT TAACAAGACA
ACCGTGGGTA CTCACAAAAT GCGGATACTC CGGAAAATGC AGGTCAATAG TCTCATCAAG
CTGATCGAAA AGGTCAGAAT GTTGAGTTAG
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| Protein sequence | MNILIIEDEP LTVLGLKQKI KEINPAAMVD NAPSVDMAFE LTGQNTYELI ILDIDIKGKA
GAGVVERMKT LYPATAILVI TDLDERIYGL PYIKAGSDGF LSKLAPSAQF DEAIRGMMVM
GKYASTALQQ QIIQENHVTR SVRHANPLKS ISAREKQVMN HLIAGKSTAE IAAILNINKT
TVGTHKMRIL RKMQVNSLIK LIEKVRMLS
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