More than 300 homologs were found in PanDaTox collection
for query gene CA2559_06590 on replicon NC_014230
Organism: Croceibacter atlanticus HTCC2559



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014230  CA2559_06590  DNA-binding response regulator, LuxR family protein  100 
 
 		 210 aa  410  1e-114  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  35.61 
 
 		 217 aa  138  4.999999999999999e-32  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010676  Bphyt_6866  two component transcriptional regulator, LuxR family  34.93 
 
 		 202 aa  137  8.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.140006  normal  0.169631 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  34.16 
 
 		 216 aa  136  2e-31  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  35.15 
 
 		 214 aa  136  3.0000000000000003e-31  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  33.66 
 
 		 216 aa  135  4e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B2906  two component LuxR family transcriptional regulator  34.16 
 
 		 203 aa  135  4e-31  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010623  Bphy_4334  two component LuxR family transcriptional regulator  35.24 
 
 		 209 aa  135  7.000000000000001e-31  Burkholderia phymatum STM815  Bacteria  normal  0.255025  normal  1 
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  34.65 
 
 		 215 aa  133  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  35.5 
 
 		 235 aa  130  1.0000000000000001e-29  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007404  Tbd_2237  two component LuxR family transcriptional regulator  35.82 
 
 		 211 aa  129  2.0000000000000002e-29  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_5584  two component transcriptional regulator, LuxR family  31.68 
 
 		 215 aa  128  8.000000000000001e-29  Burkholderia phytofirmans PsJN  Bacteria  normal  0.282667  normal  1 
 
 
-
 
NC_009075  BURPS668_A1228  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  9.000000000000001e-29  Burkholderia pseudomallei 668  Bacteria  normal  0.0904383  n/a   
 
 
-
 
NC_009079  BMA10247_A1725  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_0760  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA0703  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia mallei ATCC 23344  Bacteria  normal  0.533722  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1154  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia pseudomallei 1106a  Bacteria  normal  0.324728  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2427  LuxR family DNA-binding response regulator  32.67 
 
 		 282 aa  127  1.0000000000000001e-28  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II1570  LuxR family DNA-binding response regulator  32.67 
 
 		 215 aa  127  1.0000000000000001e-28  Burkholderia thailandensis E264  Bacteria  normal  0.17909  n/a   
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  34 
 
 		 223 aa  126  2.0000000000000002e-28  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010086  Bmul_4256  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  125  4.0000000000000003e-28  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.282152  normal  1 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  31.03 
 
 		 221 aa  125  4.0000000000000003e-28  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_3774  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  124  8.000000000000001e-28  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.329832 
 
 
-
 
NC_010552  BamMC406_4248  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  124  8.000000000000001e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.206342  normal  1 
 
 
-
 
NC_010087  Bmul_5903  two component LuxR family transcriptional regulator  31.19 
 
 		 215 aa  124  1e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.68975  normal  0.398777 
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  36.63 
 
 		 213 aa  124  1e-27  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  36.63 
 
 		 213 aa  124  1e-27  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_007511  Bcep18194_B1652  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  124  1e-27  Burkholderia sp. 383  Bacteria  normal  0.187578  normal  0.308689 
 
 
-
 
NC_010524  Lcho_1402  two component LuxR family transcriptional regulator  31.5 
 
 		 211 aa  124  1e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  34.17 
 
 		 233 aa  123  2e-27  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010515  Bcenmc03_5989  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  123  2e-27  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008543  Bcen2424_4365  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  123  2e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  0.902614  normal  1 
 
 
-
 
NC_010524  Lcho_1595  two component LuxR family transcriptional regulator  31.82 
 
 		 209 aa  122  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.00167261 
 
 
-
 
NC_007650  BTH_II1247  LuxR family DNA-binding response regulator  32.18 
 
 		 215 aa  122  3e-27  Burkholderia thailandensis E264  Bacteria  normal  0.32702  n/a   
 
 
-
 
NC_008061  Bcen_4002  two component LuxR family transcriptional regulator  31.68 
 
 		 215 aa  123  3e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  31.19 
 
 		 220 aa  122  4e-27  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_003295  RSc0192  response regulator transcription regulator protein  33.17 
 
 		 215 aa  122  5e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.028731 
 
 
-
 
CP001637  EcDH1_3078  two component transcriptional regulator, LuxR family  33.18 
 
 		 210 aa  121  7e-27  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009801  EcE24377A_0577  transcriptional regulator FimZ  33.18 
 
 		 210 aa  121  7e-27  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010557  BamMC406_6196  two component LuxR family transcriptional regulator  30.69 
 
 		 215 aa  121  7e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.280791  normal  0.522243 
 
 
-
 
NC_011353  ECH74115_0636  transcriptional regulator FimZ  33.18 
 
 		 210 aa  121  7e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.931873  normal  0.250092 
 
 
-
 
NC_010498  EcSMS35_0580  transcriptional regulator FimZ  33.33 
 
 		 210 aa  121  7e-27  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
CP001509  ECD_00485  predicted DNA-binding transcriptional regulator  32.7 
 
 		 210 aa  120  9.999999999999999e-27  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_00490  hypothetical protein  32.7 
 
 		 210 aa  120  9.999999999999999e-27  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  31.41 
 
 		 218 aa  120  9.999999999999999e-27  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_010468  EcolC_3087  transcriptional regulator FimZ  32.7 
 
 		 210 aa  120  9.999999999999999e-27  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1400  two component LuxR family transcriptional regulator  34.67 
 
 		 216 aa  120  9.999999999999999e-27  Dechloromonas aromatica RCB  Bacteria  normal  0.973321  normal  0.0605156 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  120  9.999999999999999e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  30.2 
 
 		 214 aa  120  9.999999999999999e-27  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_007650  BTH_II0851  DNA-binding response regulator  32.02 
 
 		 223 aa  120  9.999999999999999e-27  Burkholderia thailandensis E264  Bacteria  normal  0.0464733  n/a   
 
 
-
 
NC_009800  EcHS_A0610  transcriptional regulator FimZ  32.7 
 
 		 210 aa  120  9.999999999999999e-27  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008782  Ajs_3509  two component LuxR family transcriptional regulator  35.2 
 
 		 239 aa  120  1.9999999999999998e-26  Acidovorax sp. JS42  Bacteria  normal  0.325902  normal  1 
 
 
-
 
NC_011992  Dtpsy_2832  two component transcriptional regulator, LuxR family  35.2 
 
 		 210 aa  120  1.9999999999999998e-26  Acidovorax ebreus TPSY  Bacteria  normal  0.988429  n/a   
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  32.67 
 
 		 215 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  32.67 
 
 		 215 aa  120  1.9999999999999998e-26  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_013501  Rmar_1122  two component transcriptional regulator, LuxR family  32.67 
 
 		 234 aa  119  1.9999999999999998e-26  Rhodothermus marinus DSM 4252  Bacteria  normal  0.752968  n/a   
 
 
-
 
NC_008786  Veis_0032  two component LuxR family transcriptional regulator  34.69 
 
 		 210 aa  119  3e-26  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.245451  normal  1 
 
 
-
 
NC_009436  Ent638_0993  transcriptional regulator FimZ  34.13 
 
 		 210 aa  119  3e-26  Enterobacter sp. 638  Bacteria  normal  1  hitchhiker  0.000287084 
 
 
-
 
NC_006349  BMAA1518.1  DNA-binding response regulator  32.2 
 
 		 223 aa  119  3.9999999999999996e-26  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.000399536  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0127  LuxR family DNA-binding response regulator  31.19 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.914848  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0560  DNA-binding response regulator  32.2 
 
 		 223 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0224831  n/a   
 
 
-
 
NC_008835  BMA10229_2085  DNA-binding response regulator  32.2 
 
 		 264 aa  119  3.9999999999999996e-26  Burkholderia mallei NCTC 10229  Bacteria  normal  0.844485  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1551  LuxR family DNA-binding response regulator  31.19 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  29.9 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A1634  LuxR family DNA-binding response regulator  31.19 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_3595  two component LuxR family transcriptional regulator  29.9 
 
 		 215 aa  119  3.9999999999999996e-26  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_1620  two component LuxR family transcriptional regulator  32.2 
 
 		 206 aa  118  4.9999999999999996e-26  Pseudomonas putida W619  Bacteria  normal  1  normal  0.0222153 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  34.67 
 
 		 213 aa  118  4.9999999999999996e-26  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0849  two component LuxR family transcriptional regulator  33.67 
 
 		 209 aa  118  6e-26  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  31 
 
 		 213 aa  118  6e-26  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  32.84 
 
 		 214 aa  118  6e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.33 
 
 		 215 aa  118  7e-26  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_010465  YPK_2269  two component LuxR family transcriptional regulator  34.18 
 
 		 210 aa  118  7e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_011758  Mchl_5446  two component transcriptional regulator, LuxR family  29.65 
 
 		 218 aa  118  7e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.26634  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2160  LuxR family DNA-binding response regulator  34.18 
 
 		 210 aa  118  7e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_008825  Mpe_A0581  two component LuxR family transcriptional regulator  31.75 
 
 		 210 aa  117  7.999999999999999e-26  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  35.23 
 
 		 215 aa  117  7.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal  1 
 
 
-
 
NC_009441  Fjoh_1791  two component LuxR family transcriptional regulator  36.49 
 
 		 209 aa  117  9e-26  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_007951  Bxe_A1460  two component LuxR family transcriptional regulator  33.5 
 
 		 210 aa  117  9e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.39219  normal  0.352919 
 
 
-
 
NC_011205  SeD_A0598  transcriptional regulator FimZ  33.33 
 
 		 210 aa  117  9.999999999999999e-26  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.110504 
 
 
-
 
NC_010002  Daci_1809  two component LuxR family transcriptional regulator  34.18 
 
 		 210 aa  117  9.999999999999999e-26  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009075  BURPS668_A2151  DNA-binding response regulator  32.18 
 
 		 214 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 668  Bacteria  normal  0.639034  n/a   
 
 
-
 
NC_010681  Bphyt_2656  two component transcriptional regulator, LuxR family  33 
 
 		 210 aa  117  9.999999999999999e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.756738  normal  0.520546 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31 
 
 		 213 aa  117  9.999999999999999e-26  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2062  LuxR family DNA-binding response regulator  32.18 
 
 		 214 aa  117  9.999999999999999e-26  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0947149  n/a   
 
 
-
 
NC_009079  BMA10247_A0766  DNA-binding response regulator  32.18 
 
 		 214 aa  117  9.999999999999999e-26  Burkholderia mallei NCTC 10247  Bacteria  normal  0.261512  n/a   
 
 
-
 
NC_011149  SeAg_B0595  transcriptional regulator FimZ  33.33 
 
 		 210 aa  117  9.999999999999999e-26  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.447967  n/a   
 
 
-
 
NC_007958  RPD_3789  response regulator receiver  32.99 
 
 		 228 aa  117  9.999999999999999e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0916709 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  29.7 
 
 		 215 aa  117  9.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_008609  Ppro_3481  two component LuxR family transcriptional regulator  32.51 
 
 		 212 aa  116  1.9999999999999998e-25  Pelobacter propionicus DSM 2379  Bacteria  normal  0.016753  n/a   
 
 
-
 
NC_009438  Sputcn32_0304  two component LuxR family transcriptional regulator  32.68 
 
 		 207 aa  115  3e-25  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  29.7 
 
 		 213 aa  115  3e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A2113  LuxR family DNA-binding response regulator  34.18 
 
 		 210 aa  116  3e-25  Yersinia pestis Angola  Bacteria  normal  1  normal  0.616678 
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  33.82 
 
 		 224 aa  116  3e-25  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  34.36 
 
 		 211 aa  115  3.9999999999999997e-25  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C0659  transcriptional regulator FimZ  32.85 
 
 		 210 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.611229  normal  1 
 
 
-
 
NC_007778  RPB_4035  two component LuxR family transcriptional regulator  31.96 
 
 		 228 aa  115  5e-25  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011080  SNSL254_A0602  transcriptional regulator FimZ  32.85 
 
 		 210 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.379869  normal  0.0923244 
 
 
-
 
NC_009656  PSPA7_2093  putative two-component response regulator  35.58 
 
 		 207 aa  115  5e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A0594  transcriptional regulator FimZ  32.85 
 
 		 210 aa  115  5e-25  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.627077  hitchhiker  0.00790766 
 
 
-
 
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