Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal_1943 |
Symbol | |
ID | 4844121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS155 |
Kingdom | Bacteria |
Replicon accession | NC_009052 |
Strand | + |
Start bp | 2257681 |
End bp | 2258325 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640119163 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001050316 |
Protein GI | 126174167 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATTTA GTCATGGTAA AGTGATCAAT ATTTTAGTGG TCGATGATCA TTCGTTGATT TTCGACGGAT TACTGGGTTG TTTAGCGCCT TATCCAGAGC TTAATCTAAT TGGATCGGTT GAAGATGGGC TCGCGGTATA CGAGAAATGC CTCAAACTCA GACCAGATCT GGTTTTTATG GATCTGAAAT TACCGGGAAT GGGTGGATTT GACGTGATTC GTCAGCTCAG ACAACGTTGG CCAGAGATGA TGATTATCAT GTTAACGGCG ACGGTTGAGG AAAAAAGTGC GCGGGAAGCG CTCGATGTCG GCGCCAATGG TTATGTGTTA AAATATAGCC CTAAGAGCAC GCTGTTAGCG GCAATCAAAT GTGTATGTAA GGGTAAAAAC TTTATCGATC CTAGCTTAGA TGAGAGACAA ATTGCTGCTT TGAGTGGGGT AGTCGATGGG GATATGCCTT TGCTGACCCC CCGCGAGCAA CAAGTGCTAA AACTCATCTG TGAGGGGCGC CGCAACCGTG ATATTGCCGA AGATTTAGTG ATTGGTTTAA AAACGGTAGA GACTCACAGG ATGAATTTAA TGCGCAAACT TAATGCGCAT AACGTCGCCG AGTTAATGCA TTGGGTACAA AGGCTTGGAT TATGA
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Protein sequence | MEFSHGKVIN ILVVDDHSLI FDGLLGCLAP YPELNLIGSV EDGLAVYEKC LKLRPDLVFM DLKLPGMGGF DVIRQLRQRW PEMMIIMLTA TVEEKSAREA LDVGANGYVL KYSPKSTLLA AIKCVCKGKN FIDPSLDERQ IAALSGVVDG DMPLLTPREQ QVLKLICEGR RNRDIAEDLV IGLKTVETHR MNLMRKLNAH NVAELMHWVQ RLGL
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