More than 300 homologs were found in PanDaTox collection
for query gene Amir_4573 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_4573  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
235 aa  452  1.0000000000000001e-126  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4575  HAD-superfamily hydrolase, subfamily IA, variant 3  43.67 
 
 
236 aa  110  1.0000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3998  phosphoglycolate phosphatase  33.02 
 
 
226 aa  86.3  4e-16  Pseudomonas mendocina ymp  Bacteria  normal  0.739792  normal  0.543367 
 
 
-
 
NC_008740  Maqu_1874  HAD family hydrolase  29.86 
 
 
216 aa  84.3  0.000000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.785736  n/a   
 
 
-
 
NC_010424  Daud_0525  HAD family hydrolase  32.52 
 
 
209 aa  84  0.000000000000002  Candidatus Desulforudis audaxviator MP104C  Bacteria  hitchhiker  0.00124351  n/a   
 
 
-
 
NC_010501  PputW619_4786  phosphoglycolate phosphatase  32.14 
 
 
272 aa  81.6  0.000000000000008  Pseudomonas putida W619  Bacteria  normal  normal  0.602175 
 
 
-
 
NC_008345  Sfri_1492  HAD family hydrolase  28.36 
 
 
217 aa  81.3  0.00000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.210059  n/a   
 
 
-
 
NC_007777  Francci3_0431  3-amino-5-hydroxybenoic acid synthesis related  31.3 
 
 
263 aa  80.1  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_2034  HAD family hydrolase  28.23 
 
 
216 aa  79.3  0.00000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.645104  normal  0.0672621 
 
 
-
 
NC_009438  Sputcn32_1575  HAD family hydrolase  26.07 
 
 
238 aa  77.4  0.0000000000002  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.000310395  n/a   
 
 
-
 
NC_009656  PSPA7_0752  phosphoglycolate phosphatase  29.72 
 
 
272 aa  77.4  0.0000000000002  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_2255  HAD-superfamily hydrolase, subfamily IA, variant 3  25.93 
 
 
209 aa  76.3  0.0000000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  hitchhiker  0.00490459 
 
 
-
 
NC_002947  PP_0416  phosphoglycolate phosphatase  27.36 
 
 
272 aa  74.7  0.000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_07930  phosphoglycolate phosphatase  28.3 
 
 
272 aa  74.7  0.000000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.00282972 
 
 
-
 
NC_009052  Sbal_1712  HAD family hydrolase  25.53 
 
 
239 aa  74.3  0.000000000002  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000000827821  n/a   
 
 
-
 
NC_011138  MADE_02338  putative phosphoglycolate phosphatase, contains a phosphatase-like domain  28.77 
 
 
234 aa  73.6  0.000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0463297  n/a   
 
 
-
 
NC_002939  GSU2192  phosphoglycolate phosphatase  29.9 
 
 
217 aa  72.8  0.000000000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2655  HAD-superfamily hydrolase, subfamily IA, variant 3  25.53 
 
 
239 aa  72.8  0.000000000004  Shewanella baltica OS223  Bacteria  normal  0.019501  hitchhiker  0.000128755 
 
 
-
 
NC_004578  PSPTO_0567  phosphoglycolate phosphatase  26.27 
 
 
266 aa  73.2  0.000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4610  phosphoglycolate phosphatase  26.73 
 
 
272 aa  73.2  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_1752  HAD family hydrolase  25.21 
 
 
238 aa  72.8  0.000000000004  Shewanella baltica OS195  Bacteria  hitchhiker  0.00000718269  normal  0.2896 
 
 
-
 
NC_009512  Pput_0450  phosphoglycolate phosphatase  27.39 
 
 
272 aa  72.4  0.000000000005  Pseudomonas putida F1  Bacteria  normal  normal  0.416285 
 
 
-
 
NC_010322  PputGB1_0447  phosphoglycolate phosphatase  26.89 
 
 
272 aa  72  0.000000000007  Pseudomonas putida GB-1  Bacteria  normal  normal  0.558752 
 
 
-
 
NC_007492  Pfl01_5119  phosphoglycolate phosphatase  25.94 
 
 
272 aa  72  0.000000000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_2632  HAD family hydrolase  27.23 
 
 
216 aa  72  0.000000000008  Shewanella sediminis HAW-EB3  Bacteria  normal  0.861911  hitchhiker  0.000131082 
 
 
-
 
NC_009654  Mmwyl1_2240  HAD family hydrolase  24.88 
 
 
214 aa  71.6  0.00000000001  Marinomonas sp. MWYL1  Bacteria  normal  0.279618  normal  0.937061 
 
 
-
 
NC_009802  CCC13826_0740  hypothetical protein  24.74 
 
 
212 aa  71.2  0.00000000001  Campylobacter concisus 13826  Bacteria  normal  0.347846  n/a   
 
 
-
 
NC_009092  Shew_1595  HAD family hydrolase  28.57 
 
 
219 aa  70.9  0.00000000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00389314  normal  0.0112895 
 
 
-
 
NC_007954  Sden_2300  HAD family hydrolase  26.44 
 
 
215 aa  71.2  0.00000000001  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000000835779  n/a   
 
 
-
 
NC_009921  Franean1_1661  AHBA synthesis associated protein  28.78 
 
 
214 aa  71.2  0.00000000001  Frankia sp. EAN1pec  Bacteria  normal  normal  0.49792 
 
 
-
 
NC_008740  Maqu_2496  phosphoglycolate phosphatase  29.63 
 
 
221 aa  70.9  0.00000000002  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_2251  phosphoglycolate phosphatase  30.14 
 
 
229 aa  70.5  0.00000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4555  phosphoglycolate phosphatase  31.94 
 
 
461 aa  70.1  0.00000000003  Sphingomonas wittichii RW1  Bacteria  normal  0.82365  normal  0.133597 
 
 
-
 
NC_010172  Mext_0280  HAD family hydrolase  27.93 
 
 
233 aa  70.1  0.00000000003  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3458  HAD-superfamily hydrolase, subfamily IA, variant 1  31.39 
 
 
252 aa  69.7  0.00000000004  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00396228  hitchhiker  0.00386241 
 
 
-
 
NC_012039  Cla_0387  conserved hypothetical protein, putative HAD superfamily hydrolase  23.27 
 
 
214 aa  69.7  0.00000000004  Campylobacter lari RM2100  Bacteria  normal  0.322414  n/a   
 
 
-
 
NC_011757  Mchl_0323  HAD-superfamily hydrolase, subfamily IA, variant 1  27.93 
 
 
233 aa  69.3  0.00000000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0341719 
 
 
-
 
NC_007404  Tbd_1562  putative hydrolase  28.71 
 
 
218 aa  68.9  0.00000000006  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.320439  normal  0.240105 
 
 
-
 
NC_008148  Rxyl_2310  HAD family hydrolase  34.82 
 
 
221 aa  68.6  0.00000000008  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.523408  n/a   
 
 
-
 
NC_009665  Shew185_1709  HAD family hydrolase  24.79 
 
 
238 aa  68.6  0.00000000008  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000621435  n/a   
 
 
-
 
NC_007517  Gmet_2290  HAD family hydrolase  28.44 
 
 
223 aa  68.6  0.00000000009  Geobacter metallireducens GS-15  Bacteria  normal  0.783453  normal  0.134252 
 
 
-
 
NC_009707  JJD26997_1807  HAD superfamily hydrolase  24.6 
 
 
212 aa  68.6  0.00000000009  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4839  AHBA synthesis associated protein  29.69 
 
 
237 aa  67.8  0.0000000001  Frankia sp. EAN1pec  Bacteria  normal  0.098143  normal  0.0397379 
 
 
-
 
NC_002976  SERP0218  HAD superfamily hydrolase  22.54 
 
 
215 aa  67  0.0000000002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS2673  bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase  22.91 
 
 
459 aa  67.4  0.0000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.0852435  n/a   
 
 
-
 
NC_007530  GBAA_2866  bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase  22.91 
 
 
459 aa  67.4  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_2111  phosphoglycolate phosphatase  28.37 
 
 
228 aa  67  0.0000000002  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_2643  HAD family hydrolase  29.39 
 
 
227 aa  67.4  0.0000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.735097  normal  0.197279 
 
 
-
 
NC_010725  Mpop_0356  HAD-superfamily hydrolase, subfamily IA, variant 1  28.34 
 
 
233 aa  67.8  0.0000000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_0734  HAD family hydrolase  29.95 
 
 
241 aa  67.4  0.0000000002  Jannaschia sp. CCS1  Bacteria  normal  0.879574  normal 
 
 
-
 
NC_007912  Sde_1621  TatD-related deoxyribonuclease  26.21 
 
 
214 aa  67.4  0.0000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.0243824  normal 
 
 
-
 
NC_012039  Cla_0304  HAD-superfamily hydrolase  25 
 
 
211 aa  66.6  0.0000000003  Campylobacter lari RM2100  Bacteria  normal  0.61412  n/a   
 
 
-
 
NC_003295  RSc0581  putative phosphoglycolate phosphatase protein  27.52 
 
 
233 aa  65.9  0.0000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_2625  MTA/SAH nucleosidase, C-terminal region (5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase, C-terminal region)  22.22 
 
 
265 aa  65.9  0.0000000005  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000000238008  n/a   
 
 
-
 
NC_007520  Tcr_0265  phosphoglycolate phosphatase  29.79 
 
 
227 aa  65.9  0.0000000005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2878  phosphoglycolate phosphatase  28.64 
 
 
226 aa  65.5  0.0000000008  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3215  HAD-superfamily hydrolase, subfamily IA, variant 1  29.02 
 
 
217 aa  65.1  0.0000000008  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.246246 
 
 
-
 
NC_010505  Mrad2831_0854  HAD family hydrolase  28.34 
 
 
221 aa  65.5  0.0000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.249022  decreased coverage  0.000200034 
 
 
-
 
NC_007484  Noc_2493  phosphoglycolate phosphatase  26.05 
 
 
225 aa  65.1  0.0000000009  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35600  predicted phosphatase  29.03 
 
 
220 aa  65.1  0.0000000009  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_2871  putative MTA/SAH nucleosidase / phosphatase  22.94 
 
 
220 aa  65.1  0.0000000009  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000413304 
 
 
-
 
NC_008787  CJJ81176_1470  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  22.66 
 
 
213 aa  65.1  0.000000001  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  hitchhiker  0.000674726  n/a   
 
 
-
 
NC_007614  Nmul_A2370  phosphoglycolate phosphatase  28.28 
 
 
227 aa  64.7  0.000000001  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0914  hypothetical protein  25.4 
 
 
216 aa  65.1  0.000000001  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1697  HAD family hydrolase  26.44 
 
 
231 aa  64.3  0.000000001  Serratia proteamaculans 568  Bacteria  normal  normal  0.0993915 
 
 
-
 
NC_003912  CJE1650  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  23.3 
 
 
213 aa  63.5  0.000000002  Campylobacter jejuni RM1221  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_5953  phosphoglycolate phosphatase  28.77 
 
 
257 aa  64.3  0.000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0174691 
 
 
-
 
NC_007963  Csal_1594  HAD family hydrolase  31.22 
 
 
234 aa  64.3  0.000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.109016  n/a   
 
 
-
 
NC_008009  Acid345_1784  HAD family hydrolase  29.49 
 
 
226 aa  63.5  0.000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.889068  normal 
 
 
-
 
NC_011894  Mnod_7122  HAD-superfamily hydrolase, subfamily IA, variant 1  28.91 
 
 
219 aa  63.9  0.000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_2897  bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase  21.68 
 
 
458 aa  63.2  0.000000003  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.0000336981  n/a   
 
 
-
 
NC_013174  Jden_2445  Haloacid dehalogenase domain protein hydrolase  31.55 
 
 
232 aa  63.5  0.000000003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.0477823 
 
 
-
 
NC_009565  TBFG_12262  hypothetical protein  29.67 
 
 
291 aa  63.2  0.000000003  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4762  HAD family hydrolase  28.71 
 
 
242 aa  63.2  0.000000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.698376  hitchhiker  0.00269567 
 
 
-
 
NC_010622  Bphy_0735  phosphoglycolate phosphatase  30 
 
 
237 aa  63.5  0.000000003  Burkholderia phymatum STM815  Bacteria  normal  0.442963  normal 
 
 
-
 
NC_008347  Mmar10_1760  HAD family hydrolase  29.79 
 
 
260 aa  63.2  0.000000003  Maricaulis maris MCS10  Bacteria  normal  0.960773  normal  0.487326 
 
 
-
 
NC_006274  BCZK2594  phosphatase, C-terminal region  21.43 
 
 
264 aa  63.2  0.000000004  Bacillus cereus E33L  Bacteria  normal  0.131304  n/a   
 
 
-
 
NC_007347  Reut_A2273  HAD family hydrolase  27.49 
 
 
219 aa  62.8  0.000000004  Ralstonia eutropha JMP134  Bacteria  normal  0.768763  n/a   
 
 
-
 
NC_009656  PSPA7_2187  putative hydrolase  29.05 
 
 
230 aa  63.2  0.000000004  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0143931  n/a   
 
 
-
 
NC_008942  Mlab_1212  hypothetical protein  24.77 
 
 
219 aa  63.2  0.000000004  Methanocorpusculum labreanum Z  Archaea  normal  0.0173059  normal  0.0170431 
 
 
-
 
NC_010681  Bphyt_3012  phosphoglycolate phosphatase  30 
 
 
237 aa  62.8  0.000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0258131  normal  0.0275568 
 
 
-
 
NC_011883  Ddes_1139  HAD-superfamily hydrolase, subfamily IA, variant 1  29.44 
 
 
217 aa  62.8  0.000000005  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.652563  n/a   
 
 
-
 
NC_009253  Dred_2449  HAD family hydrolase  23.91 
 
 
217 aa  62.8  0.000000005  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0190416  n/a   
 
 
-
 
NC_011662  Tmz1t_0925  phosphoglycolate phosphatase  30.89 
 
 
224 aa  62.4  0.000000005  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0743  phosphoglycolate phosphatase  27.31 
 
 
225 aa  62.8  0.000000005  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_14840  HAD-superfamily hydrolase  27.8 
 
 
220 aa  62.4  0.000000006  Azotobacter vinelandii DJ  Bacteria  normal  0.770171  n/a   
 
 
-
 
NC_011662  Tmz1t_1603  Haloacid dehalogenase domain protein hydrolase  27.93 
 
 
219 aa  62.4  0.000000006  Thauera sp. MZ1T  Bacteria  normal  0.699082  n/a   
 
 
-
 
NC_008609  Ppro_1187  phosphoglycolate phosphatase  24.24 
 
 
218 aa  62.4  0.000000006  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00990405  n/a   
 
 
-
 
NC_013203  Apar_0414  HAD-superfamily hydrolase, subfamily IA, variant 3  26.67 
 
 
217 aa  62.4  0.000000006  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_2229  phosphoglycolate phosphatase  26.7 
 
 
227 aa  62  0.000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.40738  normal 
 
 
-
 
NC_011894  Mnod_6944  phosphoglycolate phosphatase  33.49 
 
 
257 aa  62  0.000000008  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2829  phosphoglycolate phosphatase  28.18 
 
 
221 aa  62  0.000000008  Rhodoferax ferrireducens T118  Bacteria  normal  0.0461088  n/a   
 
 
-
 
NC_013422  Hneap_2110  phosphoglycolate phosphatase  25.34 
 
 
225 aa  62  0.000000008  Halothiobacillus neapolitanus c2  Bacteria  normal  0.782136  n/a   
 
 
-
 
NC_011146  Gbem_0766  HAD-superfamily hydrolase, subfamily IA, variant 1  27.8 
 
 
222 aa  61.2  0.00000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2434  HAD-superfamily hydrolase, subfamily IA, variant 1  27.94 
 
 
218 aa  61.2  0.00000001  Thauera sp. MZ1T  Bacteria  normal  0.282448  n/a   
 
 
-
 
NC_009654  Mmwyl1_1058  phosphoglycolate phosphatase  23.94 
 
 
227 aa  61.6  0.00000001  Marinomonas sp. MWYL1  Bacteria  normal  0.234796  normal  0.363243 
 
 
-
 
NC_007778  RPB_2065  HAD-superfamily hydrolase  33.33 
 
 
216 aa  61.2  0.00000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.803499  normal 
 
 
-
 
NC_013093  Amir_3289  AHBA synthesis associated protein  29.44 
 
 
264 aa  61.2  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_25590  putative hydrolase  27.78 
 
 
230 aa  61.2  0.00000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.080664  normal 
 
 
-
 
NC_008599  CFF8240_0391  phosphoglycolate phosphatase  26.52 
 
 
216 aa  61.6  0.00000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  n/a   
 
 
-
 
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