Gene Smal_3215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3215 
Symbol 
ID6476269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3601453 
End bp3602106 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content68% 
IMG OID642732412 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_002029597 
Protein GI194366987 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.246246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCG ACCACGGCAG GGATGTGCTG TTCTTCGACC TCGACGGCAC GCTGATCGAT 
TCGCAGGTGG GCATCACCGC CTGCATCGCC TACGCGCTGC AGAAGATGGA CCATCCGGTG
CCGCCGCAGG ACACCCTGCT GGGCTGGATC GGTCCGTCGT TGCGGACCAC CTTCGCGCCG
CTGTTCGTCG AACCGGCGCG GGTGGAACAG GCCGTCGGCT ACTACCGTGA ACGTTTCGAT
GCCGAAGGCT GGCGCGAGCA CACGGTGTAT CCGCAGGTGG AAGACACGCT GCGCACGCTG
CACGGTCGTG GTCACCGCCT GGCGGTGGTC ACCGCCAAGA ACGAGCCGCA TGCGCGCCGC
ATCCTTGCCC ACCTGCCGTT CGGCGGGCTG TTCGAGGAGA TCGTCGGCTC GACCCTGGAT
GGCTCGCGCA GCCACAAGCC GGAACTGGTC GGTGAAGCGC TGCGCCGGCT GCAGGTGCAG
CCGGCGCACT GCTGGATGAT CGGCGACCGC CGCATGGACA TCGAAGGCGC GCGTCACCAC
GGCCTGCGCA GCATCGGTGT GCTGTGGGGC TTCGGTGGCG AGCAGGAGCT GACCGAGGCC
GGCGCCGGGC AACTGGCACG CGAACCGGCG CAGCTGGAAA CGCTGCTGGC GTGA
 
Protein sequence
MNADHGRDVL FFDLDGTLID SQVGITACIA YALQKMDHPV PPQDTLLGWI GPSLRTTFAP 
LFVEPARVEQ AVGYYRERFD AEGWREHTVY PQVEDTLRTL HGRGHRLAVV TAKNEPHARR
ILAHLPFGGL FEEIVGSTLD GSRSHKPELV GEALRRLQVQ PAHCWMIGDR RMDIEGARHH
GLRSIGVLWG FGGEQELTEA GAGQLAREPA QLETLLA