| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_0766 |
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| Symbol | |
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| ID | 6783599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 902744 |
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| End bp | 903412 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642766737 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_002137588 |
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| Protein GI | 197117161 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCCTA CACGGCTGCT CATTTTCGAC CTGGACGGGA CGCTGATCGA TTCGCTCCCC
GACCTGACCG ACGCCACCAA CCTGATCCGC AGCAACTACG GCCTCCCCGA AATAGGGATT
CCCGAGGTCC GCAAGTTGGT AGGGCAGGGG GCGCGGAACC TGGTAGAGCG GGCGCTCCCC
GGGGCAACGG CGGCGCAGGT GGACCAGGCG CTGGGCGTAT TTCTCGATTA CAACCTGGCC
CACATAGCCG ACAAGACCCG TCCCTATCCG GGCGTCAGCG AGACCCTTAA GGAGCTTAGG
AACTTCGACA TCCCCATGGT GGTCCTCTCC AACAAGAACG TCGCCCTCTG CAGGGAAGTC
CTCGCCAAGC TGGCTATCGG GGACGCCTTC GCCGAGGTAT TCGGGGCCGA CTCCTTCCCC
TACAGGAAGC CCTCCCCCGA GCCTGTGCTG GCCGTCCTGA AACAATATAA GATCGAAGCC
GCTGAATGCG TCATGGTGGG GGACAGTATC AACGACATCG CAGCAGGATT AGGGGCAGGC
GTTTTCACCG TCGGCTGCAG TTACGGTTAT GGCGAGGTGA GTGAGCTTGC AGGAGCCAAC
TATCAGGTAT CAGATTTTCA GTCATTGCTG AATTTGCCGT TTTTTAACAG GAAAAGCAGT
GAGCAATGA
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| Protein sequence | MAPTRLLIFD LDGTLIDSLP DLTDATNLIR SNYGLPEIGI PEVRKLVGQG ARNLVERALP
GATAAQVDQA LGVFLDYNLA HIADKTRPYP GVSETLKELR NFDIPMVVLS NKNVALCREV
LAKLAIGDAF AEVFGADSFP YRKPSPEPVL AVLKQYKIEA AECVMVGDSI NDIAAGLGAG
VFTVGCSYGY GEVSELAGAN YQVSDFQSLL NLPFFNRKSS EQ
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