Gene Daci_0743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0743 
Symbol 
ID5746297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp824673 
End bp825350 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID641295823 
Productphosphoglycolate phosphatase 
Protein accessionYP_001561774 
Protein GI160896192 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAA ACTTCATTCC GTTGAACCCA CAGCAACTGG ACGCCGCCAT CGTTGATCTC 
GACGGCACCA TGGTCAACAC CCTGGGCGAC TTCGCCGAAG CCCTCAACCG CATGCTGGCG
GACCTGCAAC TGCCGGCCAT CGCCCCGCAG GCCATCGAGA CCATGGTGGG CAAGGGTTCG
GAGCACCTGA TCCGCTCGGT GCTGGCCCAT GTGGGCGCGG CCGATGTGGA TGCCATCTAC
GGCCAGGCCT GGCAGCGCTA CGAGCACCAC TACCTGCAGC TCAACGGCCA GTTCGCCGAG
GTCTATCCGG GCGTGCTCGA AGGCCTGCAG GCCCTGCGCG CACGCGGCCT GCGGCTGGCC
TGCCTGACCA ACAAGCCGCT GTCCTTCGCG CAGCCGCTGC TGGCACAAAA GGGCCTGGCG
CCGCTGTTCG AGCAGGTCTT CGGCGGGGAC TCCTTCGAGC GCAAGAAGCC CGACCCGCTG
CCCCTGCTCA AGACCTGCGA GGCCCTGGGC ACCTCCCCCG CACGCACGCT GATGCTGGGC
GACTCCAGCA ACGACGCCCA GGCCGCGCGC GCCGCAGGCT GCCCCGTGGT GCTGGTCAGC
TACGGCTACA ACCACGGCCA GCCCGTGCGC CAGGTCGATG CCGACGGCTT TGTCGACGCG
CTGACCGAGC TGGCCTGA
 
Protein sequence
MISNFIPLNP QQLDAAIVDL DGTMVNTLGD FAEALNRMLA DLQLPAIAPQ AIETMVGKGS 
EHLIRSVLAH VGAADVDAIY GQAWQRYEHH YLQLNGQFAE VYPGVLEGLQ ALRARGLRLA
CLTNKPLSFA QPLLAQKGLA PLFEQVFGGD SFERKKPDPL PLLKTCEALG TSPARTLMLG
DSSNDAQAAR AAGCPVVLVS YGYNHGQPVR QVDADGFVDA LTELA