Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU2192 |
Symbol | cbbZ |
ID | 2685760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 2404342 |
End bp | 2404995 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637126885 |
Product | phosphoglycolate phosphatase |
Protein accession | NP_953241 |
Protein GI | 39997290 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCCCCTT CAATTGATCT TATCATCTTC GACCTTGATG GAACCCTTAT CGATTCTCTC GACGATCTCA CCGATGCCGT GAACCATATG CTCTCCGCGC TGGGGCGGGA GCGTCTCACC CGCGATGCCG TTCGCACCAT GGTGGGGCAG GGGGCGCGGC GGCTGGTGGA GCGCGCCATG CCCGGCGGCG CCGCGGCAGA GATCGAGCGC GGGCTGGAGC TGTTTCTCGA CTACAACCGG GAACACATCG CGGTGCGTAC GGCCTTCTAC CCGGGTGCTC TGGAGGCGCT GGCCCGGTTT CGCGGACAGG GAAAGCGGAT GGCGGTCATC TCCAACAAGA ACGTCGATCT CTGTCGCAGC GTGCTCGTTG CCCTGGGGGC CGAGCAGTGG TTCGAGGAGA TCATGGGGGC GGACTCGCTT CCCGCGCGCA AGCCGTCACC GGAGCCTGTA CTGAAGCTGT TGGCGGACTT TGGCGTGCCG CGGGAACGGG CCGTCATCAT CGGCGACAGT ATCAATGACG TGGCCGCCGG CAAAGGGGCG GGCGTTACCA CCGTGGGGTG TACCTGGGGA TATGGTGAAC GGAGCGAAAT TGCCGACGCC GACTATCTGG TCGACACCTA TGGTGCCCTG GTGACTCTGC CGCTCTTTGT CTGA
|
Protein sequence | MPPSIDLIIF DLDGTLIDSL DDLTDAVNHM LSALGRERLT RDAVRTMVGQ GARRLVERAM PGGAAAEIER GLELFLDYNR EHIAVRTAFY PGALEALARF RGQGKRMAVI SNKNVDLCRS VLVALGAEQW FEEIMGADSL PARKPSPEPV LKLLADFGVP RERAVIIGDS INDVAAGKGA GVTTVGCTWG YGERSEIADA DYLVDTYGAL VTLPLFV
|
| |