Gene PP_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_0416 
Symbolgph 
ID1044138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp504617 
End bp505435 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID637143795 
Productphosphoglycolate phosphatase 
Protein accessionNP_742582 
Protein GI26987157 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCT TCGAGCAGCT GTTCCCGGGG ACGCTGCCAA GGCTGGTGAT GTTCGATCTG 
GACGGTACCC TGATCGATTC CGTGCCTGAC CTGGCCGCCG CCGTGGACCG CATGCTGCTC
GAACTGGGGC GCCCGCCTGC TGGCCTTGAG GCCGTGCGCC ACTGGGTTGG CAATGGCGCC
CAGGTGCTGG TGCGCCGCGC GTTGGCGGGG GGCATCGACC ATGCCGACGT GGACGATGCG
CTGGCAGAAC AGGCGCTGGC GCTGTTCATG GACGCTTATG CCGAAAGCCA CGAACTTACC
GTGGTCTACC CCGGTGTGCG CGACACCCTG CGCTGGCTGC GCAAGCAGGG CGTGGAGATG
GCGCTGATCA CCAACAAGCC TGAGCGCTTT GTTGGCCCGC TGCTGGACCA GATGAAGATC
GGTAATTTCT TCCGCTGGAT CATTGGTGGC GACACCTTGC CGCAGAAAAA GCCCGACCCG
GCGGCGTTGC TGTTCGTCAT GCAGATGGCC GGTGTCACCC CGCAGCAGTC CCTGTTTGTC
GGTGATTCGC GCAGTGACGT GCAGGCGGCC AAGGCGGCTG GCGTGCAATG CGTGGGCCTG
ACCTACGGCT ATAACCATGG CCGGCCGATC GACGCCGAAT CCCCCAGCCT GGTAATCGAC
GACCTGCGCG CATTGCTGCC CGGTTGCGCA GACCCGGCCA CTGGGATAAC GTTGGCGGAC
CTTCAAGCCT CACAAGACAG AGAGTCCACC GTGGCGGTTA CTGGCAAATT CTGGATGAAA
GTCATCAAGG CCTTGGCCCG TTGGCGTTGG CGCGCCTGA
 
Protein sequence
MSGFEQLFPG TLPRLVMFDL DGTLIDSVPD LAAAVDRMLL ELGRPPAGLE AVRHWVGNGA 
QVLVRRALAG GIDHADVDDA LAEQALALFM DAYAESHELT VVYPGVRDTL RWLRKQGVEM
ALITNKPERF VGPLLDQMKI GNFFRWIIGG DTLPQKKPDP AALLFVMQMA GVTPQQSLFV
GDSRSDVQAA KAAGVQCVGL TYGYNHGRPI DAESPSLVID DLRALLPGCA DPATGITLAD
LQASQDREST VAVTGKFWMK VIKALARWRW RA