Gene Tgr7_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTgr7_2878 
Symbol 
ID7315315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThioalkalivibrio sp. HL-EbGR7 
KingdomBacteria 
Replicon accessionNC_011901 
Strand
Start bp3017486 
End bp3018166 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID643617778 
Productphosphoglycolate phosphatase 
Protein accessionYP_002514938 
Protein GI220936039 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATAG CCCGACCCAG GATGGTGCTC ATCGACCTGG ACGGCACGCT GGTGGACAGC 
GTGCCGGACC TGGCCTTCTG CGTGGACGCC ATGATGCGTG AGCTGGGCCT GCCGGAGCGT
GGCGAGGCCG CGGTTCGCCA GTGGGTGGGC AACGGCGTGG AGCGCCTGGT GCAGCGGGCG
CTGATCAACG CCGTGGACGG CGATCCGGAG CCGTCGGAGT TCCAGCGCGC CCTCCCGGTG
TTCATGCGCC TGTACAAGGA CAACACCTCC GGGCGCAGCT GCCTGTATCC GGGGGTGCGT
GAGGGGCTCG ACTATCTCAA ACGCACCGGC CTGCGCCTGG CCTGCGTCAC CAACAAGGCC
GAGCAGTTCA CCCTGCCGCT GCTGCGGGAC ATGGGCATCC TGGGCGATTT CGAGCTGGTG
GTCAGCGGCG ATACCCTGCC GGTGAAAAAG CCCGATCCCG CGCCGCTCCT GCATGCCGCA
GAGAAGCTGG GTGTCACGCC TGCCGAGTCC CTCATGGTGG GTGATTCCAG AAGCGACGTG
AAGGCCGCCC GGGCCGCCGG TTTCCCCATC GTGTGCGTGA GCTACGGCTA CAACCACGGC
GAGGACATCC GCAACTACAG CCCTGACGCG GTAATCGACC GCCTGGACCA GATCCAGGGG
CTGCTGGAAG ACGCGGCATG A
 
Protein sequence
MPIARPRMVL IDLDGTLVDS VPDLAFCVDA MMRELGLPER GEAAVRQWVG NGVERLVQRA 
LINAVDGDPE PSEFQRALPV FMRLYKDNTS GRSCLYPGVR EGLDYLKRTG LRLACVTNKA
EQFTLPLLRD MGILGDFELV VSGDTLPVKK PDPAPLLHAA EKLGVTPAES LMVGDSRSDV
KAARAAGFPI VCVSYGYNHG EDIRNYSPDA VIDRLDQIQG LLEDAA