| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_0525 |
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| Symbol | |
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| ID | 6026569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Desulforudis audaxviator MP104C |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010424 |
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| Strand | - |
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| Start bp | 562922 |
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| End bp | 563551 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641593362 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001716699 |
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| Protein GI | 169830717 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00124351 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACCGTAA GAGCCGTGCT TTTTGACCTG GACGGAACGT TGATCGACAC GATTCCCTTG
ATCCGCTGGA CCTTCGAACG GGTTTTCGCA GACTTCGGCC TGCCCTGGGA AAACGGTGAA
GTGCTGCACA CCGTGGGACT CCCCCTGCGG GAAATTGCCG CCCGGTATAT GCCGGACCGG
GCGGACGAAT TCATGGAACG GTATGCAGCC TTCCAGAAGA CCAGATTCAG GGAACTGACC
AGAGCTTATC CGGGAGCCGT GGAAACCTTG GCAACCATCA AGTCAGCCGG CTACCGCACC
GGAGTGGTCA CCTCCAAACG TCGGGAACCC GCCCTGGCAA GTTTGGCCCT CACCGGACTT
GACCAACACA TCGAAGCGGT CGTGACCGCG GATGACGTAA CCAAGCCAAA GCCCGACCCG
GAACCCGTGT TCAAGGCCCT TGAACTTCTG CACACGCGGC CCCAGAACGC GGCTTACATC
GGCGACAGTT GGTACGACGT CGTAGCCGGC AAACAGGCCG GCGTGACCAC CGTCGGCGCG
ACATGGGGCA TAGCGAGTCG GGAACAACTG GCCGAACACG CCCCCGACAT CATCGTGGAT
TCCTGGGACG AGTTTCTGGC TAACCTGTAG
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| Protein sequence | MTVRAVLFDL DGTLIDTIPL IRWTFERVFA DFGLPWENGE VLHTVGLPLR EIAARYMPDR
ADEFMERYAA FQKTRFRELT RAYPGAVETL ATIKSAGYRT GVVTSKRREP ALASLALTGL
DQHIEAVVTA DDVTKPKPDP EPVFKALELL HTRPQNAAYI GDSWYDVVAG KQAGVTTVGA
TWGIASREQL AEHAPDIIVD SWDEFLANL
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