Gene Rxyl_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2310 
Symbol 
ID4117529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2322852 
End bp2323517 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content74% 
IMG OID638037091 
ProductHAD family hydrolase 
Protein accessionYP_645051 
Protein GI108805114 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.523408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCTTG AGGCCGCCCT CTTCGACTTC GACGGGACGC TGGTGGACAC CACGGAGCTC 
ATACACCAGT CCATGCGCCA CGCCGTGCGG CGGGTGCTCG GGCGGGAGCT TCCGCGGGAG
GTTCTGCTCG CCAACGTCGG GCAGCCCCTG CCGCGCCAGA TGGAGCTTCT GGACCCCGGG
CGCGCCGCCG AGCTTCTGGA GGTCTACAGG GAGCACAACC ACGCCCACCA CGACGACCTG
ATCCGGGAGT TCCCCGGCGT GGAGGGGGCG CTGGAGCGCC TGAAGGAGGA GGGGCTCGGG
GTGGCGGTGG TGACCTCCAA GCGCCGGCTC GCCGTGGAGA TGGCCCTCCG GGTCTTCCCC
CGCCTCGGCG AGCTGGTGGA CCACTTCGTG ACCATGGAGG ACACCCCCCG GCACAAGCCC
GACCCGGAAC CGCTGCTGCG GGCGCTCTCG CTCCTCGGCG CCCGGCCCGG GGAGGCCGCC
TACGTCGGGG ACTCGCCCTT CGACGTGGCC GCGGCGAAGG CCGCGGGCAT AAGGAGCGTG
GCCGTCGGCT GGGGGGCCTT CCCCGAAGCG GCGCTGCGGG CGGCGGGCCC CGACCACCTG
GTGCCCGGCG TGCCGGAGGC GGCGGAGCTG CTCCTCCGCC TCCGGCGCGG GGAGGAGGCC
CCCTAA
 
Protein sequence
MRLEAALFDF DGTLVDTTEL IHQSMRHAVR RVLGRELPRE VLLANVGQPL PRQMELLDPG 
RAAELLEVYR EHNHAHHDDL IREFPGVEGA LERLKEEGLG VAVVTSKRRL AVEMALRVFP
RLGELVDHFV TMEDTPRHKP DPEPLLRALS LLGARPGEAA YVGDSPFDVA AAKAAGIRSV
AVGWGAFPEA ALRAAGPDHL VPGVPEAAEL LLRLRRGEEA P