Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2310 |
Symbol | |
ID | 4117529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2322852 |
End bp | 2323517 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638037091 |
Product | HAD family hydrolase |
Protein accession | YP_645051 |
Protein GI | 108805114 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.523408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCTTG AGGCCGCCCT CTTCGACTTC GACGGGACGC TGGTGGACAC CACGGAGCTC ATACACCAGT CCATGCGCCA CGCCGTGCGG CGGGTGCTCG GGCGGGAGCT TCCGCGGGAG GTTCTGCTCG CCAACGTCGG GCAGCCCCTG CCGCGCCAGA TGGAGCTTCT GGACCCCGGG CGCGCCGCCG AGCTTCTGGA GGTCTACAGG GAGCACAACC ACGCCCACCA CGACGACCTG ATCCGGGAGT TCCCCGGCGT GGAGGGGGCG CTGGAGCGCC TGAAGGAGGA GGGGCTCGGG GTGGCGGTGG TGACCTCCAA GCGCCGGCTC GCCGTGGAGA TGGCCCTCCG GGTCTTCCCC CGCCTCGGCG AGCTGGTGGA CCACTTCGTG ACCATGGAGG ACACCCCCCG GCACAAGCCC GACCCGGAAC CGCTGCTGCG GGCGCTCTCG CTCCTCGGCG CCCGGCCCGG GGAGGCCGCC TACGTCGGGG ACTCGCCCTT CGACGTGGCC GCGGCGAAGG CCGCGGGCAT AAGGAGCGTG GCCGTCGGCT GGGGGGCCTT CCCCGAAGCG GCGCTGCGGG CGGCGGGCCC CGACCACCTG GTGCCCGGCG TGCCGGAGGC GGCGGAGCTG CTCCTCCGCC TCCGGCGCGG GGAGGAGGCC CCCTAA
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Protein sequence | MRLEAALFDF DGTLVDTTEL IHQSMRHAVR RVLGRELPRE VLLANVGQPL PRQMELLDPG RAAELLEVYR EHNHAHHDDL IREFPGVEGA LERLKEEGLG VAVVTSKRRL AVEMALRVFP RLGELVDHFV TMEDTPRHKP DPEPLLRALS LLGARPGEAA YVGDSPFDVA AAKAAGIRSV AVGWGAFPEA ALRAAGPDHL VPGVPEAAEL LLRLRRGEEA P
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