| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1562 |
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| Symbol | |
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| ID | 3672042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1644183 |
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| End bp | 1644839 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710248 |
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| Product | putative hydrolase |
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| Protein accession | YP_315320 |
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| Protein GI | 74317580 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.320439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.240105 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC AATTTGACCT GCTGATTTTC GACTGGGACG GCACCTTGAT GGACTCGGCC
GGCGTGATCG TCGATTCGAT CCAGCGTGCC TGCGTCGATA TCGGCCTGCC GACGCCGACC
GAGCACGCCT CGCGCCAGAT CATCGGCCTT GGTCTCGTTC AGGCGCTGCA GGCGCTCGTT
CCCGATCTGC CCGCCGACGA CTACCCGCGT CTGGTTGAGC GCTACCGCAA GCATTACCTC
GGCCGCGACG CCGCGATCCC GCTGTTCCCG GGCGTGGTCG ACGGCATTCG CGCGCTGCAC
TCGAGTGGCT TCCAGCTCGC GGTTGCGACC GGCAAGAGCC ACGTCGGCCT TTCGCGCGCA
CTCGACACGA GCGGGCTGCG GCCGTGGTTC TGCGCGACGC GCTGCGCCGA CCAGACGCAC
TCGAAGCCGC ATCCGGCGAT GGTCCTCGAA CTGATTGACG AACTCGGCGC CGACCCGGCG
CGCACGCTCG TCATCGGCGA CACGAGCCAC GACCTCCTGA TGGCCGCGAA CGCCGGCGTC
GCGAGCCTCG GCGTGACCTA CGGCGCGCAC GAGGCCGCGA GCCTCCACCC GCATGCGCCG
GCGGCGTTGC TCGACAGTTT CGACGAGGTG TACGCATGGC TCGACGCGAA CGCCTGA
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| Protein sequence | MPKQFDLLIF DWDGTLMDSA GVIVDSIQRA CVDIGLPTPT EHASRQIIGL GLVQALQALV
PDLPADDYPR LVERYRKHYL GRDAAIPLFP GVVDGIRALH SSGFQLAVAT GKSHVGLSRA
LDTSGLRPWF CATRCADQTH SKPHPAMVLE LIDELGADPA RTLVIGDTSH DLLMAANAGV
ASLGVTYGAH EAASLHPHAP AALLDSFDEV YAWLDANA
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