| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2034 |
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| Symbol | |
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| ID | 6116297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2502118 |
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| End bp | 2502768 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641633537 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001760413 |
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| Protein GI | 170726387 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.645104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0672621 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT ATGAGCTCGT CATATTTGAT TGGGATGGCA CTTTAATGGA CTCTGTAGGC
AAAATTGTTG CCTGCATGCA GCAAACGGCC AAGGTACTTG AATTTCCCAC TCCATCAGAA
TCTGCTGTAC GCAATATTAT CGGATTGTCG ATGCAGGAGG CGTTAAATAC CTTGTATCCT
GATGGTAGTG ATAGTGTTTA TCGTCAGATG ATTCAGGTGT ATCGTCAGCA GTATCTTGAA
CTTGATACCA CCCCAAGCCC ACTCTTTGAT GGGGCTGAAT TACTTTTACA GCAGCTAAAT
CAGGTAGGTT ATCAGTTGGC CGTTGCTACG GGAAAAGCCA GAGCTGGTTT AGATCGCGTA
CTCAATGAAA CTGGGTTAGG TCAGCAGTTT ATCGCCAGCC GCTGCGCCGA TGAAGCTGTG
AGTAAACCGC ATCCTGAGAT GATTCTTCAA CTATTAAATG AGCTTAATGT GGAGCCCGCC
AAGGCGCTAA TGATAGGGGA CTCGGTACAC GATATTAATA TGGCTAATAA CGCTGGAATC
GATGCTGTGG CTGTTAACTA TGGTGCCCAT GGAGAGAGTC AGTTGCTGAC ATCAAAGCCA
AAGGGCATTA TCAGTTCGCC ACTTGAACTA CTCGGCTTTT TGGGTCACTA A
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| Protein sequence | MKQYELVIFD WDGTLMDSVG KIVACMQQTA KVLEFPTPSE SAVRNIIGLS MQEALNTLYP
DGSDSVYRQM IQVYRQQYLE LDTTPSPLFD GAELLLQQLN QVGYQLAVAT GKARAGLDRV
LNETGLGQQF IASRCADEAV SKPHPEMILQ LLNELNVEPA KALMIGDSVH DINMANNAGI
DAVAVNYGAH GESQLLTSKP KGIISSPLEL LGFLGH
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