| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2300 |
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| Symbol | |
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| ID | 4018792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2723095 |
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| End bp | 2723742 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956322 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_563303 |
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| Protein GI | 91793652 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000835779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA GGCAATACGA TTTAGTGATT TTCGACTGGG ATGGCACCTT GATGGACTCA
GTGGCCAAAA TCGTTACTAG TTTGCAGTCT GTGGCTCAAG AGTTGAATAT CCCCATTCCC
ACAGAAGAGG CGGTGCGGGA TATTATCGGT TTATCCATGC AGCAGGTATT GCCTATCTTG
TTTGCAGGTC ATCAAAGCTT GTTTGATGAC ATTTTAACGA GTTATAAAAA GCATTATTTA
GCCCTTGAAG CTGTGCCCAG TCCATTATTT TATGGCGTAG AAGATTTACT TAAGCAGTTA
ACAGCTGCTG GGGTCACTTT AGCTATTGCG ACAGGGAAGG GGCGGGGTGG CCTTGAACGC
GTGCTTGGCG TTACCGGCAT AGGCCACTAC TTTGCAGCAA GTCGCACCGC CGATGAGGCA
AAGAGTAAGC CCCATCCGCA AATGTTGCAG TCGTTGCTGG CTGAGTTCGA TATCCCTGCC
CAGAGGGCTG TGATGATTGG TGATTCAGTA CTAGATTTAA CCATGGCCAA TCATGCGGGC
ATGCATTGCA TTGGCGTGAG TTATGGTGCC CATAAAGAGG GAAAATTGCT TAGCCAGTCT
CCCAAAGCGG TAGTGCACTG CGCCAGCCAA ATATTGGCGC ATTTATAG
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| Protein sequence | MNSRQYDLVI FDWDGTLMDS VAKIVTSLQS VAQELNIPIP TEEAVRDIIG LSMQQVLPIL
FAGHQSLFDD ILTSYKKHYL ALEAVPSPLF YGVEDLLKQL TAAGVTLAIA TGKGRGGLER
VLGVTGIGHY FAASRTADEA KSKPHPQMLQ SLLAEFDIPA QRAVMIGDSV LDLTMANHAG
MHCIGVSYGA HKEGKLLSQS PKAVVHCASQ ILAHL
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