Gene Noc_2493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_2493 
Symbol 
ID3704378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2838863 
End bp2839540 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID637738972 
Productphosphoglycolate phosphatase 
Protein accessionYP_344476 
Protein GI77165951 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAAAC AACCTGAAAT GATTCTTATT GACGTGGACG GTACCTTAGT AGATAGCGTA 
CCGGATCTGA CCTTTTGTAC CGATACCATG ATGGAACGGT TGGGTCTGCC CCTGCGGGGA
GAAACCAAAG TCCGGCAATG GGTGGGCAAC GGGGTAGAAC GACTCATCAA GCGGGCCTTG
GTCGATAATA TGGAGGGAGA ACCGGAAGAA GATTTATATC AAAAGGCTGA AACCATTTTT
CTGGCTCTCT ACGCAGATAA CACAAGCAAG CGTAGTCATC TCTACCCGGG GGTAAACGAG
GGATTAGCCT GGTTAAAATC CCAAGGGTAT CGTGTAGGCT GTGTTACTAA TAAGGCAGCC
CAATTTACTT ATCCTCTACT TACGGAGCTA GGGATAATTG ATTATTTCGA GATAGTCATT
AGTGGCGATA CATTACCGGA GAAAAAACCT CATCCTGCCC CCTTGCTCCA TGCGGCCAGC
CACTTTGGCA TCGCTCCTGA GAAAGCGCTA ATGATTGGGG ATTCCATTAG TGACGTAAAA
GCAGCGAGGG CGGCCAACTT CCAGATTGTC TGCCTCAGTT ATGGTTATAA TCATGGCGTG
GATATCCGTG ATAGCCAACC GGATAGCGTC ATCGATTCTC TAATTGAAAT TAAGAATTTA
TTGAGCCAAG CAGCTTAG
 
Protein sequence
MLKQPEMILI DVDGTLVDSV PDLTFCTDTM MERLGLPLRG ETKVRQWVGN GVERLIKRAL 
VDNMEGEPEE DLYQKAETIF LALYADNTSK RSHLYPGVNE GLAWLKSQGY RVGCVTNKAA
QFTYPLLTEL GIIDYFEIVI SGDTLPEKKP HPAPLLHAAS HFGIAPEKAL MIGDSISDVK
AARAANFQIV CLSYGYNHGV DIRDSQPDSV IDSLIEIKNL LSQAA