Gene Csal_1594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCsal_1594 
Symbol 
ID4027556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChromohalobacter salexigens DSM 3043 
KingdomBacteria 
Replicon accessionNC_007963 
Strand
Start bp1816858 
End bp1817562 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID637966783 
ProductHAD family hydrolase 
Protein accessionYP_573646 
Protein GI92113718 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.109016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCTATC GGCTAGTGAT CTTCGATTGG GACGGCACCT TGATGGACTC CGCGGCGCGT 
ATCGTCGCCT GCATGCAAGC GGCCGCGCGC GATGTCGGCG CCGGGCCGCT GACCGACGCG
GCCGTGCGCG ACATCATCGG CCTGGGGCTG CCCGAGGCCC TCGAGATTCT GTGCCCGGGG
ATGCCGGCCG CGCAGCGCGA ACGCATGCGC GAGCGCTATT CCGCGCACTT CGTGGCGGCG
GATCAGGTGC CGATGGCGTT TTTCGCGGGC GTGGAAGCCG GTATCGCGAG GCTGCGCGGC
GAGCCCGGGC TGCGCCTGGC CGTGGCCACC GGCAAGAGTC GTCGCGGGCT GGATCGCGTC
TTTGCCCATA CCGGCAGCGG TGACTGGTTC CATGCCAGCC GCACGGCCGA CGAGACGCGC
TCCAAGCCGC ATCCTCTGAT GCTGGAGGAA CTGCTGACCG AGACCGGGGT CGAGCCCCGC
GATGCGCTGA TGGTCGGCGA TACCGAATAC GACATGGAGA TGGCGCGTGC ACTGGGCATG
GACCGCGCGG CGGTGACCTA TGGCGTGCAT GCGCGAGAGC GACTGGCGCG CAGCCAGCCG
GTCTGCATGG TGGATACCTT TCCTGCGTTG CTCGAGGCGC TGTACGCGCC CATGGCCGAG
CCCCGGCACG CCCCCGCGAC GATGATGGCA CGGAGTGAGA CATGA
 
Protein sequence
MRYRLVIFDW DGTLMDSAAR IVACMQAAAR DVGAGPLTDA AVRDIIGLGL PEALEILCPG 
MPAAQRERMR ERYSAHFVAA DQVPMAFFAG VEAGIARLRG EPGLRLAVAT GKSRRGLDRV
FAHTGSGDWF HASRTADETR SKPHPLMLEE LLTETGVEPR DALMVGDTEY DMEMARALGM
DRAAVTYGVH ARERLARSQP VCMVDTFPAL LEALYAPMAE PRHAPATMMA RSET