Gene PA14_07930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_07930 
Symbol 
ID4385484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp682911 
End bp683729 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID639323183 
Productphosphoglycolate phosphatase 
Protein accessionYP_788781 
Protein GI116054336 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00282972 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCTG CGGAGCCGTT CTTCGCCACG CGCCTGCCGC GTCTGGTGAT GTTCGACCTG 
GATGGCACGT TGGTCGATTC CGTTCCCGAC CTCACCGCCG CGGTCGACAG CATGCTCGCC
AGCCTCGGGC GGCCACCGGC GGGCATCGAG AAGGTCCGCC AGTGGATCGG TAACGGCGCG
CGTGTGCTGG TGCGTCGCGC CCTGGCGGGA AGCATCGAGC ATGACGGCAT TGGTGAGGAA
GAAACCGAAG CCGCGCTGGC GCTGTTCATG GAGGCCTATG CCGACAGTCA TGCGCTCACC
GAGGTCTACC CCGGCGTCGT CGACACCCTC AAGTGGCTCA AGCGCAACGG CGTGGAAATG
GCGCTGATCA CCAACAAGCC GGAGCGCTTC GTCGCTCCGC TGCTGGATGA GATGAAGCTG
GGTCGCTATT TCCGCTGGAT CATCGGCGGC GACACCCTGC CGCAGCAGAA GCCCGACCCG
GCGGCGCTGC TGTTCGTGAT GAAGATGGCC GGCATCGAGC CCGAAGATGC GTTGTTCGTC
GGTGACTCGC GCAACGACGT GCTCGCCGCC AAGGCTGCCG GTGTGCGCTG CGCGGCGCTG
ACCTATGGCT ACAACCACGG CCGGCCGATC GCCGAGGAAG CGCCCACCCT GGTCATCGAC
AACCTGCGCG ACCTGCTGCC TTGCGCCGAC CAGGCCGCTG AGATAGTGTT GCCGGACGAC
TCCCTTTCCC CCTCCGACCA GCGAGATCAA GCCGTGGCGG TCAGCAAACT CTGGATGAAG
GTCATCAAGG CCCTGGCGCG TTGGCGCTGG CGCGCCTGA
 
Protein sequence
MSAAEPFFAT RLPRLVMFDL DGTLVDSVPD LTAAVDSMLA SLGRPPAGIE KVRQWIGNGA 
RVLVRRALAG SIEHDGIGEE ETEAALALFM EAYADSHALT EVYPGVVDTL KWLKRNGVEM
ALITNKPERF VAPLLDEMKL GRYFRWIIGG DTLPQQKPDP AALLFVMKMA GIEPEDALFV
GDSRNDVLAA KAAGVRCAAL TYGYNHGRPI AEEAPTLVID NLRDLLPCAD QAAEIVLPDD
SLSPSDQRDQ AVAVSKLWMK VIKALARWRW RA