Gene PSPTO_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_0567 
Symbolgph-1 
ID1182177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp622769 
End bp623569 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID637391934 
Productphosphoglycolate phosphatase 
Protein accessionNP_790414 
Protein GI28867795 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTGCAG GCAAGCTGCC CAAGCTGATC ATGTTCGATC TGGACGGCAC GCTGGTGGAC 
TCGGTCCCCG ATCTTGCCGT CGCCGTGGAC ACCATGCTGG CTGAGCTTGG CCGGCCGACA
GCCGGGCTGG AATCGGTCCG CGCCTGGGTC GGTAACGGCG CGCCGGTGCT GGTGCGTCGT
GCGCTGGCCA ACAACCTTGA CCACAGCGGT GTCGATGAAG CGCTTGCCGA GCGGGGGCTG
GACATTTTCA TGCGCGCCTA CGCTGAAAAG CACGAGTTCA CCGTGGTTTA CCCTGGCGTG
CGCGAAACCC TCAAGTGGCT GCAGAAGATG GGCGTCGAAA TGGCCCTCAT CACCAACAAG
CCGGAACGCT TCGTTGCGCC GCTGCTCGAT GAAATGAAGC TGGGGCGGTT CTTTCGCTGG
ATCATCGGTG GCGACACCAT GCCGCAGAAA AAGCCTGACC CAGCGGCGCT GTTTTTCGTG
ATGAAAATGG CCGGTGTCCC GGCCTCGCAG TCGCTGTTTG TCGGCGACTC GCGCAGTGAC
GTGCAGGCCG CCAAGGCTGC CGGTGTGGCC TGCGTTGCGC TGAGTTATGG CTACAACCAC
GGCAGGCCGA TTGCCGAGGA AAATCCGGCG ATGGTAATAG ATGATCTGCG CAGGCTGATT
CCCGGTTGCC TGGATCTGGA CGCTGAGATA CTGTTGCCCG ACATCAAACG TCCCTCCTCA
AGAGAATCCA TCGTGGTGGT CACTCGCAAA CTCTGGATGA AAGTCATCAA GGCCCTGGCC
CGCTGGCGTT GGCGCGCCTG A
 
Protein sequence
MFAGKLPKLI MFDLDGTLVD SVPDLAVAVD TMLAELGRPT AGLESVRAWV GNGAPVLVRR 
ALANNLDHSG VDEALAERGL DIFMRAYAEK HEFTVVYPGV RETLKWLQKM GVEMALITNK
PERFVAPLLD EMKLGRFFRW IIGGDTMPQK KPDPAALFFV MKMAGVPASQ SLFVGDSRSD
VQAAKAAGVA CVALSYGYNH GRPIAEENPA MVIDDLRRLI PGCLDLDAEI LLPDIKRPSS
RESIVVVTRK LWMKVIKALA RWRWRA