Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4610 |
Symbol | gph |
ID | 3370159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5468046 |
End bp | 5468864 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637654979 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_237678 |
Protein GI | 66047837 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCT TCGAGCAGTT GTTTGCAGGC AAGCTTCCCA AGCTGATCAT GTTCGACCTG GACGGCACCC TGGTGGACTC GGTGCCCGAT CTGGCCGTGG CGGTGGACAC CATGCTCGCC GAGCTGGGGC GTCCGATCGC CGGGCTGGAA TCGGTGCGGG CCTGGGTGGG CAACGGTGCG CCGGTGCTGG TACGCCGCGC GCTGGCCAAC AACCTCGACC ACAGTGGAGT CGATGACGCC CTGGCCGAGC AGGGCCTGGA AATCTTCATG CGCGCTTATG CGCAAAAGCA TGAGTTCACC GTGGTCTATC CCGGCGTGCG TGAAACCCTC AAGTGGCTGC AGAAAATGGG TGTCGAAATG GCCCTCATCA CCAACAAGCC GGAGCGCTTC GTCGCGCCGC TGCTGGACGA GATGAAGCTG GGGCGTTTCT TTCGCTGGAT CGTCGGCGGT GACACCATGC CGCAGAAAAA GCCTGATCCT GCTGCACTGT TCTTCGTGAT GAAAATGGCT GGTGCCCCTG CCTCGCAATC GCTGTTCGTC GGCGACTCGC GCAGTGACGT GCAGGCTGCC AAGGCTGCCG GTGTGGCCTG CGTCGCGTTG AGCTACGGCT ACAACCACGG GCGGCCGATT GCCGAGGAAA ACCCGGCGAT GGTGATCGAT GATCTGCGCA AACTGATTCC CGGTTGCCTG GACATGGACG CTGAGATACT GTTGCCCGAC ATCAAACGTC CCTCCTCAAG AGAATCCATC GTGGTGGTCA CTCGCAAACT CTGGATGAAA GTCATCAAGG CCCTGGCCCG CTGGCGTTGG CGCGCCTGA
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Protein sequence | MSGFEQLFAG KLPKLIMFDL DGTLVDSVPD LAVAVDTMLA ELGRPIAGLE SVRAWVGNGA PVLVRRALAN NLDHSGVDDA LAEQGLEIFM RAYAQKHEFT VVYPGVRETL KWLQKMGVEM ALITNKPERF VAPLLDEMKL GRFFRWIVGG DTMPQKKPDP AALFFVMKMA GAPASQSLFV GDSRSDVQAA KAAGVACVAL SYGYNHGRPI AEENPAMVID DLRKLIPGCL DMDAEILLPD IKRPSSRESI VVVTRKLWMK VIKALARWRW RA
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