Gene Psyr_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4610 
Symbolgph 
ID3370159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5468046 
End bp5468864 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID637654979 
Productphosphoglycolate phosphatase 
Protein accessionYP_237678 
Protein GI66047837 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TCGAGCAGTT GTTTGCAGGC AAGCTTCCCA AGCTGATCAT GTTCGACCTG 
GACGGCACCC TGGTGGACTC GGTGCCCGAT CTGGCCGTGG CGGTGGACAC CATGCTCGCC
GAGCTGGGGC GTCCGATCGC CGGGCTGGAA TCGGTGCGGG CCTGGGTGGG CAACGGTGCG
CCGGTGCTGG TACGCCGCGC GCTGGCCAAC AACCTCGACC ACAGTGGAGT CGATGACGCC
CTGGCCGAGC AGGGCCTGGA AATCTTCATG CGCGCTTATG CGCAAAAGCA TGAGTTCACC
GTGGTCTATC CCGGCGTGCG TGAAACCCTC AAGTGGCTGC AGAAAATGGG TGTCGAAATG
GCCCTCATCA CCAACAAGCC GGAGCGCTTC GTCGCGCCGC TGCTGGACGA GATGAAGCTG
GGGCGTTTCT TTCGCTGGAT CGTCGGCGGT GACACCATGC CGCAGAAAAA GCCTGATCCT
GCTGCACTGT TCTTCGTGAT GAAAATGGCT GGTGCCCCTG CCTCGCAATC GCTGTTCGTC
GGCGACTCGC GCAGTGACGT GCAGGCTGCC AAGGCTGCCG GTGTGGCCTG CGTCGCGTTG
AGCTACGGCT ACAACCACGG GCGGCCGATT GCCGAGGAAA ACCCGGCGAT GGTGATCGAT
GATCTGCGCA AACTGATTCC CGGTTGCCTG GACATGGACG CTGAGATACT GTTGCCCGAC
ATCAAACGTC CCTCCTCAAG AGAATCCATC GTGGTGGTCA CTCGCAAACT CTGGATGAAA
GTCATCAAGG CCCTGGCCCG CTGGCGTTGG CGCGCCTGA
 
Protein sequence
MSGFEQLFAG KLPKLIMFDL DGTLVDSVPD LAVAVDTMLA ELGRPIAGLE SVRAWVGNGA 
PVLVRRALAN NLDHSGVDDA LAEQGLEIFM RAYAQKHEFT VVYPGVRETL KWLQKMGVEM
ALITNKPERF VAPLLDEMKL GRFFRWIVGG DTMPQKKPDP AALFFVMKMA GAPASQSLFV
GDSRSDVQAA KAAGVACVAL SYGYNHGRPI AEENPAMVID DLRKLIPGCL DMDAEILLPD
IKRPSSRESI VVVTRKLWMK VIKALARWRW RA