| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_2110 |
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| Symbol | |
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| ID | 8535269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | - |
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| Start bp | 2262695 |
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| End bp | 2263372 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646384487 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_003263974 |
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| Protein GI | 261856691 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.782136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATATTAA CGCCCAAAAT GGTGTTGTTC GATCTGGATG GTACGCTGAT CGATTCTGTG
CCGGATCTGC TGGTTGCCGT CAACCAGATG CAAGATGAAA TCGGCTTGCC CCATCGTGCA
GAAGCCGATG TTCGGAACTG GGTAGGTAAT GGTATTGAGC GCCTGGTCGA ACGCGCGCTC
ACCGACGATC TGCATGGTAC GCCCGATGCG GCACTATTCG ACAAGGCCAT GCCGATTTTC
AGACGGTTTT ATGCCGAGTC CAACGGCAAG CATTCCTGCG TATTTCCTGG CGTGAAGGAA
GGCATTGCCT ATGTCCAATC ACTGGGGTTG TCCGTCGGTT GTGTTACCAA CAAGGCCGCC
GCATTCACCT TGCCGTTACT CAAGGACATG GGGCTGTTTG ATTCATTCGA AACCGTCATT
GCCGGTGACA CCTTGCCCCT GAAAAAGCCC GACCCCGCCC CGCTAATTTA CGCTGCGGGC
TGGTTCAAGG TGCACCCACG CGATGCGTTG ATGATCGGCG ATTCAATCTC CGATGTGAAA
GCAGCGCGTG CGGCCGGTTT TTCCATTATC TGCATGAGCT ATGGCTACAA CCACGGCGAA
GACATCCGCA ATTATCACCC CGATGCGGTG ATCGATTCGA TGACCGAATT CCCCAAATTG
ATCGGTACGG CATCATGA
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| Protein sequence | MILTPKMVLF DLDGTLIDSV PDLLVAVNQM QDEIGLPHRA EADVRNWVGN GIERLVERAL
TDDLHGTPDA ALFDKAMPIF RRFYAESNGK HSCVFPGVKE GIAYVQSLGL SVGCVTNKAA
AFTLPLLKDM GLFDSFETVI AGDTLPLKKP DPAPLIYAAG WFKVHPRDAL MIGDSISDVK
AARAAGFSII CMSYGYNHGE DIRNYHPDAV IDSMTEFPKL IGTAS
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