Gene Hneap_2110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHneap_2110 
Symbol 
ID8535269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothiobacillus neapolitanus c2 
KingdomBacteria 
Replicon accessionNC_013422 
Strand
Start bp2262695 
End bp2263372 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content54% 
IMG OID646384487 
Productphosphoglycolate phosphatase 
Protein accessionYP_003263974 
Protein GI261856691 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.782136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAA CGCCCAAAAT GGTGTTGTTC GATCTGGATG GTACGCTGAT CGATTCTGTG 
CCGGATCTGC TGGTTGCCGT CAACCAGATG CAAGATGAAA TCGGCTTGCC CCATCGTGCA
GAAGCCGATG TTCGGAACTG GGTAGGTAAT GGTATTGAGC GCCTGGTCGA ACGCGCGCTC
ACCGACGATC TGCATGGTAC GCCCGATGCG GCACTATTCG ACAAGGCCAT GCCGATTTTC
AGACGGTTTT ATGCCGAGTC CAACGGCAAG CATTCCTGCG TATTTCCTGG CGTGAAGGAA
GGCATTGCCT ATGTCCAATC ACTGGGGTTG TCCGTCGGTT GTGTTACCAA CAAGGCCGCC
GCATTCACCT TGCCGTTACT CAAGGACATG GGGCTGTTTG ATTCATTCGA AACCGTCATT
GCCGGTGACA CCTTGCCCCT GAAAAAGCCC GACCCCGCCC CGCTAATTTA CGCTGCGGGC
TGGTTCAAGG TGCACCCACG CGATGCGTTG ATGATCGGCG ATTCAATCTC CGATGTGAAA
GCAGCGCGTG CGGCCGGTTT TTCCATTATC TGCATGAGCT ATGGCTACAA CCACGGCGAA
GACATCCGCA ATTATCACCC CGATGCGGTG ATCGATTCGA TGACCGAATT CCCCAAATTG
ATCGGTACGG CATCATGA
 
Protein sequence
MILTPKMVLF DLDGTLIDSV PDLLVAVNQM QDEIGLPHRA EADVRNWVGN GIERLVERAL 
TDDLHGTPDA ALFDKAMPIF RRFYAESNGK HSCVFPGVKE GIAYVQSLGL SVGCVTNKAA
AFTLPLLKDM GLFDSFETVI AGDTLPLKKP DPAPLIYAAG WFKVHPRDAL MIGDSISDVK
AARAAGFSII CMSYGYNHGE DIRNYHPDAV IDSMTEFPKL IGTAS