| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_4762 |
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| Symbol | |
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| ID | 5421332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 5287940 |
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| End bp | 5288668 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640884026 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001419638 |
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| Protein GI | 154248680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.698376 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00269567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCAC CCGAGAGCGA CGCCGAGCCC GCCCCCGATG CCGCGCCCCT GAAGCTGGTG
CTGTTCGATT GCGACGGCAC GCTGGTGGAC AGCCAGCACA TGATCGTCGC CGCCATGCGC
GACGCCCATG CGGCCCACGG CGTGCCGCTG CCGGGACGGG ACCGGTTGCT CTCGGTGGTG
GGGCTTTCCC TGCCGGAGGC CTTTGCCATG CTCTCGCAGG GTGACCTCGC CTATCCCATC
GAGGCGCTGG TGGACGCTTA TCGCAATGCC TTCACCCGGC TACGCAATGC CGAGCCGCCC
GAGCCCATGT TCGACGGCGC CTGGGAGGTG CTGGACACCC TGCGCCGGCG CGACGACGTG
GTGCTGGGCA TGGTCACCGG CAAGGCGCGG CGCGGGGTGG ACCGGGTGCT CAAGGCCCAT
GACATGGAAG GCTGGTTCGC CACCATCCAG ACCGCCGACG ACGCCCCCTC CAAGCCCCAT
CCGGCCATGG TGTTCCAGGC CATGAAGGAG ATCGGCGCGC GCCCGGAGGA GACGGTGGTG
GTCGGCGACA CCACCTATGA CGTCTCCATG GCGCTGCAGG CGGGGGCCTC CGCCCTCGGC
GTCGGCTGGG GCTATCACGA GGTGGCGGCG CTGGAGCGGG CCGGGGCGGA CCATATCGTC
CACCGGTTCG ACGAGGTGCC CGCCGCCATC TTCGATCTTC TGGCGCGCCG TCGCGCCATC
GCCGGATAG
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| Protein sequence | MTPPESDAEP APDAAPLKLV LFDCDGTLVD SQHMIVAAMR DAHAAHGVPL PGRDRLLSVV
GLSLPEAFAM LSQGDLAYPI EALVDAYRNA FTRLRNAEPP EPMFDGAWEV LDTLRRRDDV
VLGMVTGKAR RGVDRVLKAH DMEGWFATIQ TADDAPSKPH PAMVFQAMKE IGARPEETVV
VGDTTYDVSM ALQAGASALG VGWGYHEVAA LERAGADHIV HRFDEVPAAI FDLLARRRAI
AG
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