Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_0450 |
Symbol | |
ID | 5195480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 519634 |
End bp | 520452 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640584894 |
Product | phosphoglycolate phosphatase |
Protein accession | YP_001265804 |
Protein GI | 148545702 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.416285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGCT TCGAGCAGCT GTTCCCGGGG GAGCTGCCAA GGCTGGTAAT GTTCGATCTG GACGGTACCC TGATCGATTC CGTGCCTGAC CTGGCCGCCG CTGTGGACCG CATGCTGCTC GAACTGGGGC GCCCGCCTGC TGGCCTTGAG GCAGTGCGCC ACTGGGTTGG CAATGGCGCC CAGGTGCTGG TGCGCCGCGC GTTGGCGGGC GGCATCGACC ATGCCGACGT GGACGATGCG CTGGCAGAAC AGGCGCTGGC GCTGTTCATG GACGCTTATG CCGAAAGCCA TGAACTTACC GTGGTCTATC CTGGCGTGCG CGACACCCTG CGCTGGCTGC GCAAGCAGGG CGTGGAGATG GCGCTGATTA CCAACAAGCC TGAGCGCTTT GTTGGCCCGC TGCTGGACCA GATGAAGATC GGTAATTTCT TCCGCTGGAT CATTGGTGGC GACACCCTGC CGCAGAAAAA GCCCGACCCG GCGGCGTTGC TGTTCGTCAT GCAGATGGCC GGTGTCACCC CGCAGCAGTC CCTGTTTGTC GGTGATTCGC GCAGTGACGT GCAGGCGGCC AAGGCGGCTG GCGTGCAATG CGTGGGCCTG ACCTACGGCT ATAACCATGG CCGGCCGATC GACGACGAAT CCCCCAGCCT GGTAATCGAC GACCTGCGCG CATTGCTGCC CGGTTGCGCA GACCCGGCCA CTGGGATAAC GTTGGCGGAC CTTCAAGCCT CACAAGACAG AGAGTCCACC GTGGCGGTTA CTGGCAAATT CTGGATGAAA GTCATCAAGG CCTTGGCCCG TTGGCGTTGG CGCGCCTGA
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Protein sequence | MSGFEQLFPG ELPRLVMFDL DGTLIDSVPD LAAAVDRMLL ELGRPPAGLE AVRHWVGNGA QVLVRRALAG GIDHADVDDA LAEQALALFM DAYAESHELT VVYPGVRDTL RWLRKQGVEM ALITNKPERF VGPLLDQMKI GNFFRWIIGG DTLPQKKPDP AALLFVMQMA GVTPQQSLFV GDSRSDVQAA KAAGVQCVGL TYGYNHGRPI DDESPSLVID DLRALLPGCA DPATGITLAD LQASQDREST VAVTGKFWMK VIKALARWRW RA
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