| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0450 |
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| Symbol | |
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| ID | 5195480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 519634 |
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| End bp | 520452 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640584894 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_001265804 |
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| Protein GI | 148545702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.416285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGCT TCGAGCAGCT GTTCCCGGGG GAGCTGCCAA GGCTGGTAAT GTTCGATCTG
GACGGTACCC TGATCGATTC CGTGCCTGAC CTGGCCGCCG CTGTGGACCG CATGCTGCTC
GAACTGGGGC GCCCGCCTGC TGGCCTTGAG GCAGTGCGCC ACTGGGTTGG CAATGGCGCC
CAGGTGCTGG TGCGCCGCGC GTTGGCGGGC GGCATCGACC ATGCCGACGT GGACGATGCG
CTGGCAGAAC AGGCGCTGGC GCTGTTCATG GACGCTTATG CCGAAAGCCA TGAACTTACC
GTGGTCTATC CTGGCGTGCG CGACACCCTG CGCTGGCTGC GCAAGCAGGG CGTGGAGATG
GCGCTGATTA CCAACAAGCC TGAGCGCTTT GTTGGCCCGC TGCTGGACCA GATGAAGATC
GGTAATTTCT TCCGCTGGAT CATTGGTGGC GACACCCTGC CGCAGAAAAA GCCCGACCCG
GCGGCGTTGC TGTTCGTCAT GCAGATGGCC GGTGTCACCC CGCAGCAGTC CCTGTTTGTC
GGTGATTCGC GCAGTGACGT GCAGGCGGCC AAGGCGGCTG GCGTGCAATG CGTGGGCCTG
ACCTACGGCT ATAACCATGG CCGGCCGATC GACGACGAAT CCCCCAGCCT GGTAATCGAC
GACCTGCGCG CATTGCTGCC CGGTTGCGCA GACCCGGCCA CTGGGATAAC GTTGGCGGAC
CTTCAAGCCT CACAAGACAG AGAGTCCACC GTGGCGGTTA CTGGCAAATT CTGGATGAAA
GTCATCAAGG CCTTGGCCCG TTGGCGTTGG CGCGCCTGA
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| Protein sequence | MSGFEQLFPG ELPRLVMFDL DGTLIDSVPD LAAAVDRMLL ELGRPPAGLE AVRHWVGNGA
QVLVRRALAG GIDHADVDDA LAEQALALFM DAYAESHELT VVYPGVRDTL RWLRKQGVEM
ALITNKPERF VGPLLDQMKI GNFFRWIIGG DTLPQKKPDP AALLFVMQMA GVTPQQSLFV
GDSRSDVQAA KAAGVQCVGL TYGYNHGRPI DDESPSLVID DLRALLPGCA DPATGITLAD
LQASQDREST VAVTGKFWMK VIKALARWRW RA
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