More than 300 homologs were found in PanDaTox collection
for query gene Vapar_4184 on replicon NC_012791
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012791  Vapar_4184  methyl-accepting chemotaxis sensory transducer  100 
 
 
680 aa  1350    Variovorax paradoxus S110  Bacteria  normal  0.12793  n/a   
 
 
-
 
NC_011992  Dtpsy_3481  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
674 aa  527  1e-148  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_4123  methyl-accepting chemotaxis sensory transducer  50.78 
 
 
674 aa  525  1e-148  Acidovorax sp. JS42  Bacteria  normal  0.162807  normal  0.87643 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  82.46 
 
 
559 aa  481  1e-134  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4185  methyl-accepting chemotaxis sensory transducer  76.11 
 
 
579 aa  442  9.999999999999999e-123  Variovorax paradoxus S110  Bacteria  normal  0.356775  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  80.77 
 
 
577 aa  428  1e-118  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  70.45 
 
 
559 aa  413  1e-114  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010002  Daci_3084  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
719 aa  410  1e-113  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0687  methyl-accepting chemotaxis sensory transducer  69.27 
 
 
433 aa  412  1e-113  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  79.62 
 
 
516 aa  406  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  68.68 
 
 
572 aa  407  1.0000000000000001e-112  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  84.32 
 
 
566 aa  408  1.0000000000000001e-112  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_012856  Rpic12D_3066  methyl-accepting chemotaxis sensory transducer  42.81 
 
 
662 aa  404  1e-111  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc3136  putative methyl-accepting chemotaxis transmembrane protein  42.73 
 
 
661 aa  400  9.999999999999999e-111  Ralstonia solanacearum GMI1000  Bacteria  normal  0.598743  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  61.1 
 
 
542 aa  402  9.999999999999999e-111  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
569 aa  401  9.999999999999999e-111  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_3412  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
662 aa  401  9.999999999999999e-111  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  71.43 
 
 
586 aa  394  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  72.01 
 
 
559 aa  395  1e-108  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_010623  Bphy_4315  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
656 aa  390  1e-107  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6894  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
657 aa  386  1e-106  Burkholderia phytofirmans PsJN  Bacteria  normal  0.068141  normal  0.373533 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  67.43 
 
 
592 aa  383  1e-105  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007952  Bxe_B2939  methyl-accepting chemotaxis sensory transducer  40.44 
 
 
672 aa  384  1e-105  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  51.74 
 
 
585 aa  381  1e-104  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  62.13 
 
 
580 aa  379  1e-104  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  63.98 
 
 
583 aa  377  1e-103  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  69.25 
 
 
650 aa  377  1e-103  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  62.94 
 
 
557 aa  375  1e-102  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  63.51 
 
 
584 aa  374  1e-102  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  61.54 
 
 
578 aa  373  1e-102  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  62.62 
 
 
557 aa  374  1e-102  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  62.94 
 
 
557 aa  375  1e-102  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2983  methyl-accepting chemotaxis sensory transducer  67.33 
 
 
556 aa  370  1e-101  Serratia proteamaculans 568  Bacteria  normal  0.96835  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  65.17 
 
 
581 aa  370  1e-101  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  61.23 
 
 
566 aa  372  1e-101  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  62.93 
 
 
589 aa  370  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  58.31 
 
 
596 aa  370  1e-101  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  65.17 
 
 
579 aa  370  1e-101  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4309  methyl-accepting chemotaxis sensory transducer  39.57 
 
 
659 aa  368  1e-100  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.226298 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  58.17 
 
 
562 aa  366  1e-100  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_011071  Smal_1846  methyl-accepting chemotaxis sensory transducer  63.27 
 
 
755 aa  367  1e-100  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.422723  normal  0.381468 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  62.66 
 
 
549 aa  368  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  61.83 
 
 
584 aa  365  1e-99  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1684  methyl-accepting chemotaxis protein I  40.98 
 
 
676 aa  364  2e-99  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  63.61 
 
 
552 aa  364  2e-99  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  60.4 
 
 
527 aa  364  3e-99  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010717  PXO_00043  chemotaxis protein  64.87 
 
 
705 aa  363  6e-99  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.51691  n/a   
 
 
-
 
NC_009075  BURPS668_A1080  methyl-accepting chemotaxis protein  40.32 
 
 
687 aa  363  8e-99  Burkholderia pseudomallei 668  Bacteria  normal  0.469209  n/a   
 
 
-
 
NC_013421  Pecwa_1857  methyl-accepting chemotaxis sensory transducer  60.12 
 
 
561 aa  362  1e-98  Pectobacterium wasabiae WPP163  Bacteria  normal  0.769355  n/a   
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  67.77 
 
 
615 aa  362  1e-98  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  67.77 
 
 
615 aa  362  1e-98  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_010717  PXO_00054  methyl-accepting chemotaxis protein  75.78 
 
 
797 aa  362  1e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.276697  n/a   
 
 
-
 
NC_009436  Ent638_2457  methyl-accepting chemotaxis sensory transducer  60.3 
 
 
555 aa  362  2e-98  Enterobacter sp. 638  Bacteria  normal  0.890786  normal 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  62.9 
 
 
595 aa  362  2e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_011071  Smal_1847  methyl-accepting chemotaxis sensory transducer  68.4 
 
 
793 aa  361  3e-98  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.143361  normal  0.380239 
 
 
-
 
NC_010717  PXO_00041  chemotaxis protein  66.55 
 
 
752 aa  360  4e-98  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.292066  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  67.24 
 
 
589 aa  360  5e-98  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  58.89 
 
 
535 aa  360  5e-98  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  60.62 
 
 
543 aa  360  6e-98  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
588 aa  360  6e-98  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  63.94 
 
 
589 aa  359  8e-98  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  48.86 
 
 
584 aa  359  9e-98  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  55.34 
 
 
584 aa  359  9.999999999999999e-98  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0994  methyl-accepting chemotaxis protein  41.52 
 
 
678 aa  359  9.999999999999999e-98  Burkholderia pseudomallei 1106a  Bacteria  normal  0.799426  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  59.31 
 
 
537 aa  358  9.999999999999999e-98  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_012912  Dd1591_0772  methyl-accepting chemotaxis sensory transducer  38.4 
 
 
646 aa  357  2.9999999999999997e-97  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00540264  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  66.67 
 
 
525 aa  357  2.9999999999999997e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_009436  Ent638_2456  methyl-accepting protein IV  59.53 
 
 
533 aa  357  3.9999999999999996e-97  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A2308  methyl-accepting chemotaxis protein II  41.13 
 
 
684 aa  357  3.9999999999999996e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1169  methyl-accepting chemotaxis sensory transducer  65.16 
 
 
740 aa  357  3.9999999999999996e-97  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  61.96 
 
 
598 aa  356  7.999999999999999e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  62.54 
 
 
551 aa  355  1e-96  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.8 
 
 
598 aa  355  1e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4174  methyl-accepting chemotaxis sensory transducer  64.72 
 
 
522 aa  355  1e-96  Ralstonia pickettii 12J  Bacteria  normal  0.0753508  normal 
 
 
-
 
NC_012917  PC1_2609  methyl-accepting chemotaxis sensory transducer  62.66 
 
 
561 aa  355  1e-96  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012857  Rpic12D_4286  methyl-accepting chemotaxis sensory transducer  64.72 
 
 
522 aa  355  1e-96  Ralstonia pickettii 12D  Bacteria  normal  0.246906  normal  0.38481 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  58.27 
 
 
587 aa  354  2e-96  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010515  Bcenmc03_3221  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
660 aa  354  2e-96  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.229974 
 
 
-
 
NC_008061  Bcen_4070  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
660 aa  355  2e-96  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4296  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
660 aa  355  2e-96  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  68.98 
 
 
550 aa  354  2.9999999999999997e-96  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
552 aa  354  4e-96  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_008391  Bamb_3714  methyl-accepting chemotaxis sensory transducer  40.2 
 
 
660 aa  353  5.9999999999999994e-96  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010717  PXO_00047  chemotaxis protein  65.57 
 
 
733 aa  353  5.9999999999999994e-96  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_0523  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.04 
 
 
608 aa  353  7e-96  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  59.44 
 
 
532 aa  353  8e-96  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  57.73 
 
 
557 aa  353  8e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0536  methyl-accepting chemotaxis sensory transducer with Cache sensor  62.04 
 
 
609 aa  352  8.999999999999999e-96  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4192  methyl-accepting chemotaxis sensory transducer  40.03 
 
 
660 aa  352  1e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0520721  normal  0.510764 
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  59.09 
 
 
579 aa  352  1e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  60.78 
 
 
573 aa  352  1e-95  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_003296  RS03153  putative methyl-accepting chemotaxis transducer transmembrane protein  67.31 
 
 
524 aa  352  1e-95  Ralstonia solanacearum GMI1000  Bacteria  normal  0.471775  normal  0.0817308 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  59.46 
 
 
586 aa  352  1e-95  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  59.53 
 
 
591 aa  352  1e-95  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  62.03 
 
 
591 aa  352  1e-95  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_007336  Reut_C6319  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  61.93 
 
 
601 aa  351  2e-95  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_3594  methyl-accepting chemotaxis sensory transducer  38.9 
 
 
646 aa  352  2e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0366  methyl-accepting chemotaxis sensory transducer  39.35 
 
 
643 aa  352  2e-95  Enterobacter sp. 638  Bacteria  normal  normal  0.0151066 
 
 
-
 
NC_011071  Smal_1851  methyl-accepting chemotaxis sensory transducer  65.19 
 
 
745 aa  351  3e-95  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.195185 
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  59.38 
 
 
553 aa  351  3e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
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