More than 300 homologs were found in PanDaTox collection
for query gene Strop_1030 on replicon NC_009380
Organism: Salinispora tropica CNB-440



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_1030  regulatory protein, LuxR  100 
 
 		 225 aa  448  1e-125  Salinispora tropica CNB-440  Bacteria  normal  0.210652  normal  1 
 
 
-
 
NC_008148  Rxyl_0703  two component LuxR family transcriptional regulator  37.56 
 
 		 220 aa  116  3e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.901141  n/a   
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  35.38 
 
 		 209 aa  112  4.0000000000000004e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  31.34 
 
 		 216 aa  110  1.0000000000000001e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  36.36 
 
 		 209 aa  104  9e-22  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  30.62 
 
 		 216 aa  104  1e-21  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  35.12 
 
 		 207 aa  103  2e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.966789 
 
 
-
 
NC_011071  Smal_2340  two component transcriptional regulator, LuxR family  35.1 
 
 		 217 aa  102  4e-21  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.273151  normal  1 
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  34.11 
 
 		 216 aa  100  2e-20  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  33.67 
 
 		 206 aa  100  2e-20  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  hitchhiker  0.00252848 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  33.5 
 
 		 212 aa  99.8  3e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010338  Caul_0621  two component LuxR family transcriptional regulator  35.1 
 
 		 212 aa  99.8  3e-20  Caulobacter sp. K31  Bacteria  normal  1  normal  0.881689 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  25.63 
 
 		 208 aa  99  6e-20  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31.88 
 
 		 213 aa  97.8  1e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  35.1 
 
 		 214 aa  97.4  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  34.56 
 
 		 220 aa  96.7  3e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  32.29 
 
 		 227 aa  96.3  3e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  30.66 
 
 		 237 aa  96.7  3e-19  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  29.13 
 
 		 212 aa  96.3  3e-19  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  33.93 
 
 		 225 aa  96.7  3e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  31.58 
 
 		 217 aa  96.3  4e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  33.66 
 
 		 211 aa  96.3  4e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.05 
 
 		 201 aa  95.9  4e-19  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal  1 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  37.24 
 
 		 207 aa  95.9  5e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.296562 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  35.58 
 
 		 226 aa  95.1  8e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  33.49 
 
 		 216 aa  94.7  9e-19  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  30.7 
 
 		 218 aa  94.7  9e-19  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  32.26 
 
 		 222 aa  94.7  9e-19  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  35.85 
 
 		 212 aa  94.7  9e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_007410  Ava_B0029  two component LuxR family transcriptional regulator  27.31 
 
 		 220 aa  94.7  1e-18  Anabaena variabilis ATCC 29413  Bacteria  normal  0.268532  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  35.92 
 
 		 220 aa  94.7  1e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  33 
 
 		 211 aa  93.6  2e-18  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0451998 
 
 
-
 
NC_014210  Ndas_2190  two component transcriptional regulator, LuxR family  32.41 
 
 		 218 aa  93.6  2e-18  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000643495  hitchhiker  0.000215707 
 
 
-
 
NC_010625  Bphy_5955  two component LuxR family transcriptional regulator  34.15 
 
 		 215 aa  93.2  3e-18  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.132796 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  33.49 
 
 		 216 aa  93.2  3e-18  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  31.94 
 
 		 222 aa  93.2  3e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  30 
 
 		 226 aa  92.8  4e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  35.47 
 
 		 222 aa  92.4  5e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1350  two component transcriptional regulator, LuxR family  32.34 
 
 		 249 aa  92.4  5e-18  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.691965  normal  1 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  28.93 
 
 		 213 aa  92  6e-18  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  32.2 
 
 		 206 aa  92  6e-18  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  29.61 
 
 		 232 aa  92  6e-18  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_013235  Namu_4067  two component transcriptional regulator, LuxR family  31.68 
 
 		 218 aa  92  6e-18  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  0.352272 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  30.66 
 
 		 237 aa  92  7e-18  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.66 
 
 		 215 aa  91.7  7e-18  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_012803  Mlut_21900  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.05 
 
 		 230 aa  92  7e-18  Micrococcus luteus NCTC 2665  Bacteria  hitchhiker  0.00486265  n/a   
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  36.1 
 
 		 209 aa  92  7e-18  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_009439  Pmen_2668  two component LuxR family transcriptional regulator  32 
 
 		 213 aa  92  7e-18  Pseudomonas mendocina ymp  Bacteria  normal  0.18046  normal  1 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  29.7 
 
 		 214 aa  92  7e-18  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_011886  Achl_3912  two component transcriptional regulator, LuxR family  32.89 
 
 		 230 aa  92  7e-18  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  31.84 
 
 		 213 aa  91.7  8e-18  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  29.61 
 
 		 232 aa  91.7  8e-18  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  30.52 
 
 		 236 aa  90.9  1e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  33.64 
 
 		 213 aa  90.9  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0500394 
 
 
-
 
NC_012792  Vapar_5556  two component transcriptional regulator, LuxR family  27.9 
 
 		 255 aa  91.3  1e-17  Variovorax paradoxus S110  Bacteria  normal  0.853701  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  32.41 
 
 		 228 aa  90.9  1e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29.9 
 
 		 211 aa  91.3  1e-17  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1981  two component transcriptional regulator, LuxR family  33.48 
 
 		 230 aa  91.3  1e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  31.12 
 
 		 213 aa  91.3  1e-17  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  30.41 
 
 		 218 aa  90.9  1e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  29.13 
 
 		 232 aa  90.1  2e-17  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  33.95 
 
 		 215 aa  90.5  2e-17  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.82 
 
 		 221 aa  90.1  2e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  32.31 
 
 		 213 aa  90.9  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  33.95 
 
 		 215 aa  90.5  2e-17  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  29.44 
 
 		 223 aa  90.5  2e-17  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  33.95 
 
 		 215 aa  90.5  2e-17  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  31.98 
 
 		 225 aa  90.1  2e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  32.84 
 
 		 209 aa  90.1  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  30.77 
 
 		 223 aa  90.5  2e-17  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  33.5 
 
 		 223 aa  90.9  2e-17  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  31.56 
 
 		 225 aa  90.5  2e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.01 
 
 		 242 aa  89.7  3e-17  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.88 
 
 		 222 aa  89.7  3e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  32.23 
 
 		 226 aa  90.1  3e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  31 
 
 		 227 aa  89.7  3e-17  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_6235  two component transcriptional regulator, LuxR family  31.94 
 
 		 215 aa  89.7  3e-17  Actinosynnema mirum DSM 43827  Bacteria  normal  0.502704  n/a   
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  30.73 
 
 		 222 aa  90.1  3e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  32.21 
 
 		 215 aa  89.4  4e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  28.57 
 
 		 219 aa  89  5e-17  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  31.16 
 
 		 213 aa  89  5e-17  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_2295  two component transcriptional regulator, LuxR family  30.41 
 
 		 222 aa  88.6  6e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.031577  n/a   
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  31.44 
 
 		 229 aa  88.6  7e-17  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  33.02 
 
 		 221 aa  88.6  7e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  29.13 
 
 		 218 aa  88.6  7e-17  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  30.77 
 
 		 209 aa  88.6  7e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  28.71 
 
 		 224 aa  88.6  7e-17  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  31.82 
 
 		 214 aa  88.6  7e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  28.77 
 
 		 217 aa  88.6  8e-17  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  32.08 
 
 		 213 aa  88.2  9e-17  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013131  Caci_7415  two component transcriptional regulator, LuxR family  32.89 
 
 		 228 aa  88.2  9e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.933403  normal  1 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  32.09 
 
 		 230 aa  88.2  9e-17  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  32.49 
 
 		 207 aa  87.4  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal  1 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  32.06 
 
 		 217 aa  87.8  1e-16  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  30.73 
 
 		 207 aa  87.8  1e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4491  two component transcriptional regulator, LuxR family  33.18 
 
 		 225 aa  88.2  1e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  31.28 
 
 		 212 aa  87.4  1e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  31.6 
 
 		 219 aa  87.8  1e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  33.18 
 
 		 221 aa  87.8  1e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  33.33 
 
 		 250 aa  87.8  1e-16  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>